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An enriched granger causal model allowing variable static anatomical constraints

The anatomical connectivity constrains but does not fully determine functional connectivity, especially when one explores into the dynamics over the course of a trial. Therefore, an enriched granger causal model (GCM) integrated with anatomical prior information is proposed in this study, to describ...

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Detalles Bibliográficos
Autores principales: Bi, Kun, Luo, Guoping, Tian, Shui, Zhang, Siqi, Liu, Xiaoxue, Wang, Qiang, Lu, Qing, Yao, Zhijian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6411584/
https://www.ncbi.nlm.nih.gov/pubmed/30448217
http://dx.doi.org/10.1016/j.nicl.2018.11.002
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author Bi, Kun
Luo, Guoping
Tian, Shui
Zhang, Siqi
Liu, Xiaoxue
Wang, Qiang
Lu, Qing
Yao, Zhijian
author_facet Bi, Kun
Luo, Guoping
Tian, Shui
Zhang, Siqi
Liu, Xiaoxue
Wang, Qiang
Lu, Qing
Yao, Zhijian
author_sort Bi, Kun
collection PubMed
description The anatomical connectivity constrains but does not fully determine functional connectivity, especially when one explores into the dynamics over the course of a trial. Therefore, an enriched granger causal model (GCM) integrated with anatomical prior information is proposed in this study, to describe the dynamic effective connectivity to distinguish the depression and explore the pathogenesis of depression. In the proposed frame, the anatomical information was converted via an optimized transformation model, which was then integrated into the normal GCM by variational bayesian model. Magnetoencephalography (MEG) signals and diffusion tensor imaging (DTI) of 24 depressive patients and 24 matched controls were utilized for performance comparison. Together with the sliding windowed MEG signals under sad facial stimuli, the enriched GCM was applied to calculate the regional-pair dynamic effective connectivity, which were repeatedly sifted via feature selection and fed into different classifiers. From the aspects of model errors and recognition accuracy rates, results supported the superiority of the enriched GCM with anatomical priors over the normal GCM. For the effective connectivity with anatomical priors, the best subject discrimination accuracy of SVM was 85.42% (the sensitivity was 87.50% and the specificity was 83.33%). Furthermore, discriminative feature analysis suggested that the enriched GCM that detect the variable anatomical constraint on function could better detect more stringent and less dynamic brain function in depression. The proposed approach is valuable in dynamic functional dysfunction exploration in depression and could be useful for depression recognition.
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spelling pubmed-64115842019-03-22 An enriched granger causal model allowing variable static anatomical constraints Bi, Kun Luo, Guoping Tian, Shui Zhang, Siqi Liu, Xiaoxue Wang, Qiang Lu, Qing Yao, Zhijian Neuroimage Clin Article The anatomical connectivity constrains but does not fully determine functional connectivity, especially when one explores into the dynamics over the course of a trial. Therefore, an enriched granger causal model (GCM) integrated with anatomical prior information is proposed in this study, to describe the dynamic effective connectivity to distinguish the depression and explore the pathogenesis of depression. In the proposed frame, the anatomical information was converted via an optimized transformation model, which was then integrated into the normal GCM by variational bayesian model. Magnetoencephalography (MEG) signals and diffusion tensor imaging (DTI) of 24 depressive patients and 24 matched controls were utilized for performance comparison. Together with the sliding windowed MEG signals under sad facial stimuli, the enriched GCM was applied to calculate the regional-pair dynamic effective connectivity, which were repeatedly sifted via feature selection and fed into different classifiers. From the aspects of model errors and recognition accuracy rates, results supported the superiority of the enriched GCM with anatomical priors over the normal GCM. For the effective connectivity with anatomical priors, the best subject discrimination accuracy of SVM was 85.42% (the sensitivity was 87.50% and the specificity was 83.33%). Furthermore, discriminative feature analysis suggested that the enriched GCM that detect the variable anatomical constraint on function could better detect more stringent and less dynamic brain function in depression. The proposed approach is valuable in dynamic functional dysfunction exploration in depression and could be useful for depression recognition. Elsevier 2018-11-05 /pmc/articles/PMC6411584/ /pubmed/30448217 http://dx.doi.org/10.1016/j.nicl.2018.11.002 Text en © 2018 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Article
Bi, Kun
Luo, Guoping
Tian, Shui
Zhang, Siqi
Liu, Xiaoxue
Wang, Qiang
Lu, Qing
Yao, Zhijian
An enriched granger causal model allowing variable static anatomical constraints
title An enriched granger causal model allowing variable static anatomical constraints
title_full An enriched granger causal model allowing variable static anatomical constraints
title_fullStr An enriched granger causal model allowing variable static anatomical constraints
title_full_unstemmed An enriched granger causal model allowing variable static anatomical constraints
title_short An enriched granger causal model allowing variable static anatomical constraints
title_sort enriched granger causal model allowing variable static anatomical constraints
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6411584/
https://www.ncbi.nlm.nih.gov/pubmed/30448217
http://dx.doi.org/10.1016/j.nicl.2018.11.002
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