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Real-time analysis of the diphtheria outbreak in forcibly displaced Myanmar nationals in Bangladesh

BACKGROUND: Between August and December 2017, more than 625,000 Rohingya from Myanmar fled into Bangladesh, settling in informal makeshift camps in Cox’s Bazar district and joining 212,000 Rohingya already present. In early November, a diphtheria outbreak hit the camps, with 440 reported cases durin...

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Autores principales: Finger, Flavio, Funk, Sebastian, White, Kate, Siddiqui, M. Ruby, Edmunds, W. John, Kucharski, Adam J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6413455/
https://www.ncbi.nlm.nih.gov/pubmed/30857521
http://dx.doi.org/10.1186/s12916-019-1288-7
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author Finger, Flavio
Funk, Sebastian
White, Kate
Siddiqui, M. Ruby
Edmunds, W. John
Kucharski, Adam J.
author_facet Finger, Flavio
Funk, Sebastian
White, Kate
Siddiqui, M. Ruby
Edmunds, W. John
Kucharski, Adam J.
author_sort Finger, Flavio
collection PubMed
description BACKGROUND: Between August and December 2017, more than 625,000 Rohingya from Myanmar fled into Bangladesh, settling in informal makeshift camps in Cox’s Bazar district and joining 212,000 Rohingya already present. In early November, a diphtheria outbreak hit the camps, with 440 reported cases during the first month. A rise in cases during early December led to a collaboration between teams from Médecins sans Frontières—who were running a provisional diphtheria treatment centre—and the London School of Hygiene and Tropical Medicine with the goal to use transmission dynamic models to forecast the potential scale of the outbreak and the resulting resource needs. METHODS: We first adjusted for delays between symptom onset and case presentation using the observed distribution of reporting delays from previously reported cases. We then fit a compartmental transmission model to the adjusted incidence stratified by age group and location. Model forecasts with a lead time of 2 weeks were issued on 12, 20, 26 and 30 December and communicated to decision-makers. RESULTS: The first forecast estimated that the outbreak would peak on 19 December in Balukhali camp with 303 (95% posterior predictive interval 122–599) cases and would continue to grow in Kutupalong camp, requiring a bed capacity of 316 (95% posterior predictive interval (PPI) 197–499). On 19 December, a total of 54 cases were reported, lower than forecasted. Subsequent forecasts were more accurate: on 20 December, we predicted a total of 912 cases (95% PPI 367–2183) and 136 (95% PPI 55–327) hospitalizations until the end of the year, with 616 cases actually reported during this period. CONCLUSIONS: Real-time modelling enabled feedback of key information about the potential scale of the epidemic, resource needs and mechanisms of transmission to decision-makers at a time when this information was largely unknown. By 20 December, the model generated reliable forecasts and helped support decision-making on operational aspects of the outbreak response, such as hospital bed and staff needs, and with advocacy for control measures. Although modelling is only one component of the evidence base for decision-making in outbreak situations, suitable analysis and forecasting techniques can be used to gain insights into an ongoing outbreak. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s12916-019-1288-7) contains supplementary material, which is available to authorized users.
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spelling pubmed-64134552019-03-25 Real-time analysis of the diphtheria outbreak in forcibly displaced Myanmar nationals in Bangladesh Finger, Flavio Funk, Sebastian White, Kate Siddiqui, M. Ruby Edmunds, W. John Kucharski, Adam J. BMC Med Research Article BACKGROUND: Between August and December 2017, more than 625,000 Rohingya from Myanmar fled into Bangladesh, settling in informal makeshift camps in Cox’s Bazar district and joining 212,000 Rohingya already present. In early November, a diphtheria outbreak hit the camps, with 440 reported cases during the first month. A rise in cases during early December led to a collaboration between teams from Médecins sans Frontières—who were running a provisional diphtheria treatment centre—and the London School of Hygiene and Tropical Medicine with the goal to use transmission dynamic models to forecast the potential scale of the outbreak and the resulting resource needs. METHODS: We first adjusted for delays between symptom onset and case presentation using the observed distribution of reporting delays from previously reported cases. We then fit a compartmental transmission model to the adjusted incidence stratified by age group and location. Model forecasts with a lead time of 2 weeks were issued on 12, 20, 26 and 30 December and communicated to decision-makers. RESULTS: The first forecast estimated that the outbreak would peak on 19 December in Balukhali camp with 303 (95% posterior predictive interval 122–599) cases and would continue to grow in Kutupalong camp, requiring a bed capacity of 316 (95% posterior predictive interval (PPI) 197–499). On 19 December, a total of 54 cases were reported, lower than forecasted. Subsequent forecasts were more accurate: on 20 December, we predicted a total of 912 cases (95% PPI 367–2183) and 136 (95% PPI 55–327) hospitalizations until the end of the year, with 616 cases actually reported during this period. CONCLUSIONS: Real-time modelling enabled feedback of key information about the potential scale of the epidemic, resource needs and mechanisms of transmission to decision-makers at a time when this information was largely unknown. By 20 December, the model generated reliable forecasts and helped support decision-making on operational aspects of the outbreak response, such as hospital bed and staff needs, and with advocacy for control measures. Although modelling is only one component of the evidence base for decision-making in outbreak situations, suitable analysis and forecasting techniques can be used to gain insights into an ongoing outbreak. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s12916-019-1288-7) contains supplementary material, which is available to authorized users. BioMed Central 2019-03-12 /pmc/articles/PMC6413455/ /pubmed/30857521 http://dx.doi.org/10.1186/s12916-019-1288-7 Text en © The Author(s). 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research Article
Finger, Flavio
Funk, Sebastian
White, Kate
Siddiqui, M. Ruby
Edmunds, W. John
Kucharski, Adam J.
Real-time analysis of the diphtheria outbreak in forcibly displaced Myanmar nationals in Bangladesh
title Real-time analysis of the diphtheria outbreak in forcibly displaced Myanmar nationals in Bangladesh
title_full Real-time analysis of the diphtheria outbreak in forcibly displaced Myanmar nationals in Bangladesh
title_fullStr Real-time analysis of the diphtheria outbreak in forcibly displaced Myanmar nationals in Bangladesh
title_full_unstemmed Real-time analysis of the diphtheria outbreak in forcibly displaced Myanmar nationals in Bangladesh
title_short Real-time analysis of the diphtheria outbreak in forcibly displaced Myanmar nationals in Bangladesh
title_sort real-time analysis of the diphtheria outbreak in forcibly displaced myanmar nationals in bangladesh
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6413455/
https://www.ncbi.nlm.nih.gov/pubmed/30857521
http://dx.doi.org/10.1186/s12916-019-1288-7
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