Cargando…
Exposing the Causal Effect of Body Mass Index on the Risk of Type 2 Diabetes Mellitus: A Mendelian Randomization Study
Introduction: High body mass index (BMI) is a positive associated phenotype of type 2 diabetes mellitus (T2DM). Abundant studies have observed this from a clinical perspective. Since the rapid increase in a large number of genetic variants from the genome-wide association studies (GWAS), common SNPs...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6413727/ https://www.ncbi.nlm.nih.gov/pubmed/30891058 http://dx.doi.org/10.3389/fgene.2019.00094 |
_version_ | 1783402877589389312 |
---|---|
author | Cheng, Liang Zhuang, He Ju, Hong Yang, Shuo Han, Junwei Tan, Renjie Hu, Yang |
author_facet | Cheng, Liang Zhuang, He Ju, Hong Yang, Shuo Han, Junwei Tan, Renjie Hu, Yang |
author_sort | Cheng, Liang |
collection | PubMed |
description | Introduction: High body mass index (BMI) is a positive associated phenotype of type 2 diabetes mellitus (T2DM). Abundant studies have observed this from a clinical perspective. Since the rapid increase in a large number of genetic variants from the genome-wide association studies (GWAS), common SNPs of BMI and T2DM were identified as the genetic basis for understanding their associations. Currently, their causality is beginning to blur. Materials and Methods: To classify it, a Mendelian randomisation (MR), using genetic instrumental variables (IVs) to explore the causality of intermediate phenotype and disease, was utilized here to test the effect of BMI on the risk of T2DM. In this article, MR was carried out on GWAS data using 52 independent BMI SNPs as IVs. The pooled odds ratio (OR) of these SNPs was calculated using inverse-variance weighted method for the assessment of 5 kg/m(2) higher BMI on the risk of T2DM. The leave-one-out validation was conducted to identify the effect of individual SNPs. MR-Egger regression was utilized to detect potential pleiotropic bias of variants. Results: We obtained the high OR (1.470; 95% CI 1.170 to 1.847; P = 0.001), low intercept (0.004, P = 0.661), and small fluctuation of ORs {from -0.039 [(1.412 – 1.470) / 1.470)] to 0.075 [(1.568– 1.470) / 1.470)] in leave-one-out validation. Conclusion: We validate the causal effect of high BMI on the risk of T2DM. The low intercept shows no pleiotropic bias of IVs. The small alterations of ORs activated by removing individual SNPs showed no single SNP drives our estimate. |
format | Online Article Text |
id | pubmed-6413727 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-64137272019-03-19 Exposing the Causal Effect of Body Mass Index on the Risk of Type 2 Diabetes Mellitus: A Mendelian Randomization Study Cheng, Liang Zhuang, He Ju, Hong Yang, Shuo Han, Junwei Tan, Renjie Hu, Yang Front Genet Genetics Introduction: High body mass index (BMI) is a positive associated phenotype of type 2 diabetes mellitus (T2DM). Abundant studies have observed this from a clinical perspective. Since the rapid increase in a large number of genetic variants from the genome-wide association studies (GWAS), common SNPs of BMI and T2DM were identified as the genetic basis for understanding their associations. Currently, their causality is beginning to blur. Materials and Methods: To classify it, a Mendelian randomisation (MR), using genetic instrumental variables (IVs) to explore the causality of intermediate phenotype and disease, was utilized here to test the effect of BMI on the risk of T2DM. In this article, MR was carried out on GWAS data using 52 independent BMI SNPs as IVs. The pooled odds ratio (OR) of these SNPs was calculated using inverse-variance weighted method for the assessment of 5 kg/m(2) higher BMI on the risk of T2DM. The leave-one-out validation was conducted to identify the effect of individual SNPs. MR-Egger regression was utilized to detect potential pleiotropic bias of variants. Results: We obtained the high OR (1.470; 95% CI 1.170 to 1.847; P = 0.001), low intercept (0.004, P = 0.661), and small fluctuation of ORs {from -0.039 [(1.412 – 1.470) / 1.470)] to 0.075 [(1.568– 1.470) / 1.470)] in leave-one-out validation. Conclusion: We validate the causal effect of high BMI on the risk of T2DM. The low intercept shows no pleiotropic bias of IVs. The small alterations of ORs activated by removing individual SNPs showed no single SNP drives our estimate. Frontiers Media S.A. 2019-02-14 /pmc/articles/PMC6413727/ /pubmed/30891058 http://dx.doi.org/10.3389/fgene.2019.00094 Text en Copyright © 2019 Cheng, Zhuang, Ju, Yang, Han, Tan and Hu. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Genetics Cheng, Liang Zhuang, He Ju, Hong Yang, Shuo Han, Junwei Tan, Renjie Hu, Yang Exposing the Causal Effect of Body Mass Index on the Risk of Type 2 Diabetes Mellitus: A Mendelian Randomization Study |
title | Exposing the Causal Effect of Body Mass Index on the Risk of Type 2 Diabetes Mellitus: A Mendelian Randomization Study |
title_full | Exposing the Causal Effect of Body Mass Index on the Risk of Type 2 Diabetes Mellitus: A Mendelian Randomization Study |
title_fullStr | Exposing the Causal Effect of Body Mass Index on the Risk of Type 2 Diabetes Mellitus: A Mendelian Randomization Study |
title_full_unstemmed | Exposing the Causal Effect of Body Mass Index on the Risk of Type 2 Diabetes Mellitus: A Mendelian Randomization Study |
title_short | Exposing the Causal Effect of Body Mass Index on the Risk of Type 2 Diabetes Mellitus: A Mendelian Randomization Study |
title_sort | exposing the causal effect of body mass index on the risk of type 2 diabetes mellitus: a mendelian randomization study |
topic | Genetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6413727/ https://www.ncbi.nlm.nih.gov/pubmed/30891058 http://dx.doi.org/10.3389/fgene.2019.00094 |
work_keys_str_mv | AT chengliang exposingthecausaleffectofbodymassindexontheriskoftype2diabetesmellitusamendelianrandomizationstudy AT zhuanghe exposingthecausaleffectofbodymassindexontheriskoftype2diabetesmellitusamendelianrandomizationstudy AT juhong exposingthecausaleffectofbodymassindexontheriskoftype2diabetesmellitusamendelianrandomizationstudy AT yangshuo exposingthecausaleffectofbodymassindexontheriskoftype2diabetesmellitusamendelianrandomizationstudy AT hanjunwei exposingthecausaleffectofbodymassindexontheriskoftype2diabetesmellitusamendelianrandomizationstudy AT tanrenjie exposingthecausaleffectofbodymassindexontheriskoftype2diabetesmellitusamendelianrandomizationstudy AT huyang exposingthecausaleffectofbodymassindexontheriskoftype2diabetesmellitusamendelianrandomizationstudy |