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Convolutional neural network for cell classification using microscope images of intracellular actin networks
Automated cell classification is an important yet a challenging computer vision task with significant benefits to biomedicine. In recent years, there have been several studies attempted to build an artificial intelligence-based cell classifier using label-free cellular images obtained from an optica...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6415833/ https://www.ncbi.nlm.nih.gov/pubmed/30865716 http://dx.doi.org/10.1371/journal.pone.0213626 |
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author | Oei, Ronald Wihal Hou, Guanqun Liu, Fuhai Zhong, Jin Zhang, Jiewen An, Zhaoyi Xu, Luping Yang, Yujiu |
author_facet | Oei, Ronald Wihal Hou, Guanqun Liu, Fuhai Zhong, Jin Zhang, Jiewen An, Zhaoyi Xu, Luping Yang, Yujiu |
author_sort | Oei, Ronald Wihal |
collection | PubMed |
description | Automated cell classification is an important yet a challenging computer vision task with significant benefits to biomedicine. In recent years, there have been several studies attempted to build an artificial intelligence-based cell classifier using label-free cellular images obtained from an optical microscope. Although these studies showed promising results, such classifiers were not able to reflect the biological diversity of different types of cell. While in terms of malignant cell, it is well-known that intracellular actin filaments are altered substantially. This is thought to be closely related to the abnormal growth features of tumor cells, their ability to invade surrounding tissues and also to metastasize. Therefore, being able to classify different types of cell based on their biological behaviors using automated technique is more advantageous. This article reveals the difference in the actin cytoskeleton structures between breast normal and cancer cells, which may provide new information regarding malignant changes and be used as additional diagnostic marker. Since the features cannot be well detected by human eyes, we proposed the application of convolutional neural network (CNN) in cell classification based on actin-labeled fluorescence microscopy images. The CNN was evaluated on a large number of actin-labeled fluorescence microscopy images of one human normal breast epithelial cell line and two types of human breast cancer cell line with different levels of aggressiveness. The study revealed that the CNN performed better in the cell classification task compared to a human expert. |
format | Online Article Text |
id | pubmed-6415833 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-64158332019-04-02 Convolutional neural network for cell classification using microscope images of intracellular actin networks Oei, Ronald Wihal Hou, Guanqun Liu, Fuhai Zhong, Jin Zhang, Jiewen An, Zhaoyi Xu, Luping Yang, Yujiu PLoS One Research Article Automated cell classification is an important yet a challenging computer vision task with significant benefits to biomedicine. In recent years, there have been several studies attempted to build an artificial intelligence-based cell classifier using label-free cellular images obtained from an optical microscope. Although these studies showed promising results, such classifiers were not able to reflect the biological diversity of different types of cell. While in terms of malignant cell, it is well-known that intracellular actin filaments are altered substantially. This is thought to be closely related to the abnormal growth features of tumor cells, their ability to invade surrounding tissues and also to metastasize. Therefore, being able to classify different types of cell based on their biological behaviors using automated technique is more advantageous. This article reveals the difference in the actin cytoskeleton structures between breast normal and cancer cells, which may provide new information regarding malignant changes and be used as additional diagnostic marker. Since the features cannot be well detected by human eyes, we proposed the application of convolutional neural network (CNN) in cell classification based on actin-labeled fluorescence microscopy images. The CNN was evaluated on a large number of actin-labeled fluorescence microscopy images of one human normal breast epithelial cell line and two types of human breast cancer cell line with different levels of aggressiveness. The study revealed that the CNN performed better in the cell classification task compared to a human expert. Public Library of Science 2019-03-13 /pmc/articles/PMC6415833/ /pubmed/30865716 http://dx.doi.org/10.1371/journal.pone.0213626 Text en © 2019 Oei et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Oei, Ronald Wihal Hou, Guanqun Liu, Fuhai Zhong, Jin Zhang, Jiewen An, Zhaoyi Xu, Luping Yang, Yujiu Convolutional neural network for cell classification using microscope images of intracellular actin networks |
title | Convolutional neural network for cell classification using microscope images of intracellular actin networks |
title_full | Convolutional neural network for cell classification using microscope images of intracellular actin networks |
title_fullStr | Convolutional neural network for cell classification using microscope images of intracellular actin networks |
title_full_unstemmed | Convolutional neural network for cell classification using microscope images of intracellular actin networks |
title_short | Convolutional neural network for cell classification using microscope images of intracellular actin networks |
title_sort | convolutional neural network for cell classification using microscope images of intracellular actin networks |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6415833/ https://www.ncbi.nlm.nih.gov/pubmed/30865716 http://dx.doi.org/10.1371/journal.pone.0213626 |
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