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N-Lipidated Amino Acids and Peptides Immobilized on Cellulose Able to Split Amide Bonds

N-lipidated short peptides and amino acids immobilized on the cellulose were used as catalysts cleaved amide bonds under biomimetic conditions. In order to select catalytically most active derivatives a library of 156 N-lipidated amino acids, dipeptides and tripeptides immobilized on cellulose was o...

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Autores principales: Fraczyk, Justyna, Kaminski, Zbigniew J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6416662/
https://www.ncbi.nlm.nih.gov/pubmed/30769907
http://dx.doi.org/10.3390/ma12040578
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author Fraczyk, Justyna
Kaminski, Zbigniew J.
author_facet Fraczyk, Justyna
Kaminski, Zbigniew J.
author_sort Fraczyk, Justyna
collection PubMed
description N-lipidated short peptides and amino acids immobilized on the cellulose were used as catalysts cleaved amide bonds under biomimetic conditions. In order to select catalytically most active derivatives a library of 156 N-lipidated amino acids, dipeptides and tripeptides immobilized on cellulose was obtained. The library was synthesized from serine, histidine and glutamic acid peptides N-acylated with heptanoic, octanoic, hexadecanoic and (E)-octadec-9-enoic acids. Catalytic efficiency was monitored by spectrophotometric determination of p-nitroaniline formed by the hydrolysis of a 0.1 M solution of Z-Leu-NP. The most active 8 structures contained tripeptide fragment with 1-3 serine residues. It has been found that incorporation of metal ions into catalytic pockets increase the activity of the synzymes. The structures of the 17 most active catalysts selected from the library of complexes obtained with Cu(2+) ion varied from 16 derivatives complexed with Zn(2+) ion. For all of them, a very high reaction rate during the preliminary phase of measurements was followed by a substantial slowdown after 1 h. The catalytic activity gradually diminished after subsequent re-use. HPLC analysis of amide bond splitting confirmed that substrate consumption proceeded in two stages. In the preliminary stage 24–40% of the substrate was rapidly hydrolysed followed by the substantially lower reaction rate. Nevertheless, using the most competent synzymes product of hydrolysis was formed with a yield of 60–83% after 48h under mild and strictly biomimetic conditions.
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spelling pubmed-64166622019-03-29 N-Lipidated Amino Acids and Peptides Immobilized on Cellulose Able to Split Amide Bonds Fraczyk, Justyna Kaminski, Zbigniew J. Materials (Basel) Article N-lipidated short peptides and amino acids immobilized on the cellulose were used as catalysts cleaved amide bonds under biomimetic conditions. In order to select catalytically most active derivatives a library of 156 N-lipidated amino acids, dipeptides and tripeptides immobilized on cellulose was obtained. The library was synthesized from serine, histidine and glutamic acid peptides N-acylated with heptanoic, octanoic, hexadecanoic and (E)-octadec-9-enoic acids. Catalytic efficiency was monitored by spectrophotometric determination of p-nitroaniline formed by the hydrolysis of a 0.1 M solution of Z-Leu-NP. The most active 8 structures contained tripeptide fragment with 1-3 serine residues. It has been found that incorporation of metal ions into catalytic pockets increase the activity of the synzymes. The structures of the 17 most active catalysts selected from the library of complexes obtained with Cu(2+) ion varied from 16 derivatives complexed with Zn(2+) ion. For all of them, a very high reaction rate during the preliminary phase of measurements was followed by a substantial slowdown after 1 h. The catalytic activity gradually diminished after subsequent re-use. HPLC analysis of amide bond splitting confirmed that substrate consumption proceeded in two stages. In the preliminary stage 24–40% of the substrate was rapidly hydrolysed followed by the substantially lower reaction rate. Nevertheless, using the most competent synzymes product of hydrolysis was formed with a yield of 60–83% after 48h under mild and strictly biomimetic conditions. MDPI 2019-02-14 /pmc/articles/PMC6416662/ /pubmed/30769907 http://dx.doi.org/10.3390/ma12040578 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Fraczyk, Justyna
Kaminski, Zbigniew J.
N-Lipidated Amino Acids and Peptides Immobilized on Cellulose Able to Split Amide Bonds
title N-Lipidated Amino Acids and Peptides Immobilized on Cellulose Able to Split Amide Bonds
title_full N-Lipidated Amino Acids and Peptides Immobilized on Cellulose Able to Split Amide Bonds
title_fullStr N-Lipidated Amino Acids and Peptides Immobilized on Cellulose Able to Split Amide Bonds
title_full_unstemmed N-Lipidated Amino Acids and Peptides Immobilized on Cellulose Able to Split Amide Bonds
title_short N-Lipidated Amino Acids and Peptides Immobilized on Cellulose Able to Split Amide Bonds
title_sort n-lipidated amino acids and peptides immobilized on cellulose able to split amide bonds
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6416662/
https://www.ncbi.nlm.nih.gov/pubmed/30769907
http://dx.doi.org/10.3390/ma12040578
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