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A comprehensive study of immunology repertoires in both preoperative stage and postoperative stage in patients with colorectal cancer
BACKGROUND: Colorectal cancer (CRC) is the 3rd most common cancer type in the world. The correlation between immune repertoire and prognosis of CRC has been well studied in the last decades. The diversity and stability of the immune cells can be measured by hypervariable complementarity‐determining...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6418368/ https://www.ncbi.nlm.nih.gov/pubmed/30628178 http://dx.doi.org/10.1002/mgg3.504 |
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author | Liu, Xicheng Cui, Yuanyuan Zhang, Yaoxian Liu, Zhanli Zhang, Qiuli Wu, Wenyan Zheng, Zihao Li, Shien Zhang, Zhongjun Li, Yali |
author_facet | Liu, Xicheng Cui, Yuanyuan Zhang, Yaoxian Liu, Zhanli Zhang, Qiuli Wu, Wenyan Zheng, Zihao Li, Shien Zhang, Zhongjun Li, Yali |
author_sort | Liu, Xicheng |
collection | PubMed |
description | BACKGROUND: Colorectal cancer (CRC) is the 3rd most common cancer type in the world. The correlation between immune repertoire and prognosis of CRC has been well studied in the last decades. The diversity and stability of the immune cells can be measured by hypervariable complementarity‐determining region 3 (CDR3) segments of the T‐cell receptor (TCR). METHODS: In this study, we collected five healthy controls and 19 CRC patients’ peripheral blood mononuclear cells (PBMCs) in three stages, namely 1 day preoperative, 3 days’ postoperative, and 7 days’ postoperative, respectively. Simultaneously, we have also done the comparative analysis of these two different anesthesia methods, namely TIVA and CEGA. Sequencing of the TCR segments has been performed by multiplex PCR and high‐throughput next‐generation sequencing. We also analyzed the distribution of CDR3 length, highly expansion clones (HECs), TRBV, and TRBJ gene usage. RESULTS: Our result showed a significant difference between TCR CDR3 length distribution and HEC distribution between CRC patients and healthy controls. We also found that TRBV11‐2, TRBV12‐1, TRBV16, TRBV3‐2, TRBV4‐2, TRBV4‐3, TRBV5‐4, TRBV6‐8, TRBV7‐8, TRBV7‐9 and RBV11‐2, TRBV12‐1, TRBV16, TRBV3‐2, TRBV4‐2, TRBV4‐3, TRBV5‐4, TRBV6‐8, TRBV7‐8, and TRBV7‐9 usages are different between CRC patients and healthy controls. CONCLUSION: In conclusion, CRC patients were presented with different immune repertoire in comparison with healthy controls. In this study, significant difference in TRBV and TRBJ gene usage in between case and control group could provide some potential biomarker for the diagnosis and the treatment of the patients with CRC. |
format | Online Article Text |
id | pubmed-6418368 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-64183682019-03-27 A comprehensive study of immunology repertoires in both preoperative stage and postoperative stage in patients with colorectal cancer Liu, Xicheng Cui, Yuanyuan Zhang, Yaoxian Liu, Zhanli Zhang, Qiuli Wu, Wenyan Zheng, Zihao Li, Shien Zhang, Zhongjun Li, Yali Mol Genet Genomic Med Original Articles BACKGROUND: Colorectal cancer (CRC) is the 3rd most common cancer type in the world. The correlation between immune repertoire and prognosis of CRC has been well studied in the last decades. The diversity and stability of the immune cells can be measured by hypervariable complementarity‐determining region 3 (CDR3) segments of the T‐cell receptor (TCR). METHODS: In this study, we collected five healthy controls and 19 CRC patients’ peripheral blood mononuclear cells (PBMCs) in three stages, namely 1 day preoperative, 3 days’ postoperative, and 7 days’ postoperative, respectively. Simultaneously, we have also done the comparative analysis of these two different anesthesia methods, namely TIVA and CEGA. Sequencing of the TCR segments has been performed by multiplex PCR and high‐throughput next‐generation sequencing. We also analyzed the distribution of CDR3 length, highly expansion clones (HECs), TRBV, and TRBJ gene usage. RESULTS: Our result showed a significant difference between TCR CDR3 length distribution and HEC distribution between CRC patients and healthy controls. We also found that TRBV11‐2, TRBV12‐1, TRBV16, TRBV3‐2, TRBV4‐2, TRBV4‐3, TRBV5‐4, TRBV6‐8, TRBV7‐8, TRBV7‐9 and RBV11‐2, TRBV12‐1, TRBV16, TRBV3‐2, TRBV4‐2, TRBV4‐3, TRBV5‐4, TRBV6‐8, TRBV7‐8, and TRBV7‐9 usages are different between CRC patients and healthy controls. CONCLUSION: In conclusion, CRC patients were presented with different immune repertoire in comparison with healthy controls. In this study, significant difference in TRBV and TRBJ gene usage in between case and control group could provide some potential biomarker for the diagnosis and the treatment of the patients with CRC. John Wiley and Sons Inc. 2019-01-09 /pmc/articles/PMC6418368/ /pubmed/30628178 http://dx.doi.org/10.1002/mgg3.504 Text en © 2019 The Authors. Molecular Genetics & Genomic Medicine published by Wiley Periodicals, Inc. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Articles Liu, Xicheng Cui, Yuanyuan Zhang, Yaoxian Liu, Zhanli Zhang, Qiuli Wu, Wenyan Zheng, Zihao Li, Shien Zhang, Zhongjun Li, Yali A comprehensive study of immunology repertoires in both preoperative stage and postoperative stage in patients with colorectal cancer |
title | A comprehensive study of immunology repertoires in both preoperative stage and postoperative stage in patients with colorectal cancer |
title_full | A comprehensive study of immunology repertoires in both preoperative stage and postoperative stage in patients with colorectal cancer |
title_fullStr | A comprehensive study of immunology repertoires in both preoperative stage and postoperative stage in patients with colorectal cancer |
title_full_unstemmed | A comprehensive study of immunology repertoires in both preoperative stage and postoperative stage in patients with colorectal cancer |
title_short | A comprehensive study of immunology repertoires in both preoperative stage and postoperative stage in patients with colorectal cancer |
title_sort | comprehensive study of immunology repertoires in both preoperative stage and postoperative stage in patients with colorectal cancer |
topic | Original Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6418368/ https://www.ncbi.nlm.nih.gov/pubmed/30628178 http://dx.doi.org/10.1002/mgg3.504 |
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