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Objective Morphological Classification of Neocortical Pyramidal Cells

A consensus on the number of morphologically different types of pyramidal cells (PCs) in the neocortex has not yet been reached, despite over a century of anatomical studies, due to the lack of agreement on the subjective classifications of neuron types, which is based on expert analyses of neuronal...

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Autores principales: Kanari, Lida, Ramaswamy, Srikanth, Shi, Ying, Morand, Sebastien, Meystre, Julie, Perin, Rodrigo, Abdellah, Marwan, Wang, Yun, Hess, Kathryn, Markram, Henry
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6418396/
https://www.ncbi.nlm.nih.gov/pubmed/30715238
http://dx.doi.org/10.1093/cercor/bhy339
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author Kanari, Lida
Ramaswamy, Srikanth
Shi, Ying
Morand, Sebastien
Meystre, Julie
Perin, Rodrigo
Abdellah, Marwan
Wang, Yun
Hess, Kathryn
Markram, Henry
author_facet Kanari, Lida
Ramaswamy, Srikanth
Shi, Ying
Morand, Sebastien
Meystre, Julie
Perin, Rodrigo
Abdellah, Marwan
Wang, Yun
Hess, Kathryn
Markram, Henry
author_sort Kanari, Lida
collection PubMed
description A consensus on the number of morphologically different types of pyramidal cells (PCs) in the neocortex has not yet been reached, despite over a century of anatomical studies, due to the lack of agreement on the subjective classifications of neuron types, which is based on expert analyses of neuronal morphologies. Even for neurons that are visually distinguishable, there is no common ground to consistently define morphological types. The objective classification of PCs can be achieved with methods from algebraic topology, and the dendritic arborization is sufficient for the reliable identification of distinct types of cortical PCs. Therefore, we objectively identify 17 types of PCs in the rat somatosensory cortex. In addition, we provide a solution to the challenging problem of whether 2 similar neurons belong to different types or to a continuum of the same type. Our topological classification does not require expert input, is stable, and helps settle the long-standing debate on whether cell-types are discrete or continuous morphological variations of each other.
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spelling pubmed-64183962019-03-20 Objective Morphological Classification of Neocortical Pyramidal Cells Kanari, Lida Ramaswamy, Srikanth Shi, Ying Morand, Sebastien Meystre, Julie Perin, Rodrigo Abdellah, Marwan Wang, Yun Hess, Kathryn Markram, Henry Cereb Cortex Original Articles A consensus on the number of morphologically different types of pyramidal cells (PCs) in the neocortex has not yet been reached, despite over a century of anatomical studies, due to the lack of agreement on the subjective classifications of neuron types, which is based on expert analyses of neuronal morphologies. Even for neurons that are visually distinguishable, there is no common ground to consistently define morphological types. The objective classification of PCs can be achieved with methods from algebraic topology, and the dendritic arborization is sufficient for the reliable identification of distinct types of cortical PCs. Therefore, we objectively identify 17 types of PCs in the rat somatosensory cortex. In addition, we provide a solution to the challenging problem of whether 2 similar neurons belong to different types or to a continuum of the same type. Our topological classification does not require expert input, is stable, and helps settle the long-standing debate on whether cell-types are discrete or continuous morphological variations of each other. Oxford University Press 2019-04 2019-01-31 /pmc/articles/PMC6418396/ /pubmed/30715238 http://dx.doi.org/10.1093/cercor/bhy339 Text en © The Author 2019. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Original Articles
Kanari, Lida
Ramaswamy, Srikanth
Shi, Ying
Morand, Sebastien
Meystre, Julie
Perin, Rodrigo
Abdellah, Marwan
Wang, Yun
Hess, Kathryn
Markram, Henry
Objective Morphological Classification of Neocortical Pyramidal Cells
title Objective Morphological Classification of Neocortical Pyramidal Cells
title_full Objective Morphological Classification of Neocortical Pyramidal Cells
title_fullStr Objective Morphological Classification of Neocortical Pyramidal Cells
title_full_unstemmed Objective Morphological Classification of Neocortical Pyramidal Cells
title_short Objective Morphological Classification of Neocortical Pyramidal Cells
title_sort objective morphological classification of neocortical pyramidal cells
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6418396/
https://www.ncbi.nlm.nih.gov/pubmed/30715238
http://dx.doi.org/10.1093/cercor/bhy339
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