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The Persistence Length of Semiflexible Polymers in Lattice Monte Carlo Simulations
While applying computer simulations to study semiflexible polymers, it is a primary task to determine the persistence length that characterizes the chain stiffness. One frequently asked question concerns the relationship between persistence length and the bending constant of applied bending potentia...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6419224/ https://www.ncbi.nlm.nih.gov/pubmed/30960279 http://dx.doi.org/10.3390/polym11020295 |
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author | Zhang, Jing-Zi Peng, Xiang-Yao Liu, Shan Jiang, Bang-Ping Ji, Shi-Chen Shen, Xing-Can |
author_facet | Zhang, Jing-Zi Peng, Xiang-Yao Liu, Shan Jiang, Bang-Ping Ji, Shi-Chen Shen, Xing-Can |
author_sort | Zhang, Jing-Zi |
collection | PubMed |
description | While applying computer simulations to study semiflexible polymers, it is a primary task to determine the persistence length that characterizes the chain stiffness. One frequently asked question concerns the relationship between persistence length and the bending constant of applied bending potential. In this paper, theoretical persistence lengths of polymers with two different bending potentials were analyzed and examined by using lattice Monte Carlo simulations. We found that the persistence length was consistent with theoretical predictions only in bond fluctuation model with cosine squared angle potential. The reason for this is that the theoretical persistence length is calculated according to a continuous bond angle, which is discrete in lattice simulations. In lattice simulations, the theoretical persistence length is larger than that in continuous simulations. |
format | Online Article Text |
id | pubmed-6419224 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-64192242019-04-02 The Persistence Length of Semiflexible Polymers in Lattice Monte Carlo Simulations Zhang, Jing-Zi Peng, Xiang-Yao Liu, Shan Jiang, Bang-Ping Ji, Shi-Chen Shen, Xing-Can Polymers (Basel) Article While applying computer simulations to study semiflexible polymers, it is a primary task to determine the persistence length that characterizes the chain stiffness. One frequently asked question concerns the relationship between persistence length and the bending constant of applied bending potential. In this paper, theoretical persistence lengths of polymers with two different bending potentials were analyzed and examined by using lattice Monte Carlo simulations. We found that the persistence length was consistent with theoretical predictions only in bond fluctuation model with cosine squared angle potential. The reason for this is that the theoretical persistence length is calculated according to a continuous bond angle, which is discrete in lattice simulations. In lattice simulations, the theoretical persistence length is larger than that in continuous simulations. MDPI 2019-02-10 /pmc/articles/PMC6419224/ /pubmed/30960279 http://dx.doi.org/10.3390/polym11020295 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Zhang, Jing-Zi Peng, Xiang-Yao Liu, Shan Jiang, Bang-Ping Ji, Shi-Chen Shen, Xing-Can The Persistence Length of Semiflexible Polymers in Lattice Monte Carlo Simulations |
title | The Persistence Length of Semiflexible Polymers in Lattice Monte Carlo Simulations |
title_full | The Persistence Length of Semiflexible Polymers in Lattice Monte Carlo Simulations |
title_fullStr | The Persistence Length of Semiflexible Polymers in Lattice Monte Carlo Simulations |
title_full_unstemmed | The Persistence Length of Semiflexible Polymers in Lattice Monte Carlo Simulations |
title_short | The Persistence Length of Semiflexible Polymers in Lattice Monte Carlo Simulations |
title_sort | persistence length of semiflexible polymers in lattice monte carlo simulations |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6419224/ https://www.ncbi.nlm.nih.gov/pubmed/30960279 http://dx.doi.org/10.3390/polym11020295 |
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