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The Persistence Length of Semiflexible Polymers in Lattice Monte Carlo Simulations

While applying computer simulations to study semiflexible polymers, it is a primary task to determine the persistence length that characterizes the chain stiffness. One frequently asked question concerns the relationship between persistence length and the bending constant of applied bending potentia...

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Detalles Bibliográficos
Autores principales: Zhang, Jing-Zi, Peng, Xiang-Yao, Liu, Shan, Jiang, Bang-Ping, Ji, Shi-Chen, Shen, Xing-Can
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6419224/
https://www.ncbi.nlm.nih.gov/pubmed/30960279
http://dx.doi.org/10.3390/polym11020295
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author Zhang, Jing-Zi
Peng, Xiang-Yao
Liu, Shan
Jiang, Bang-Ping
Ji, Shi-Chen
Shen, Xing-Can
author_facet Zhang, Jing-Zi
Peng, Xiang-Yao
Liu, Shan
Jiang, Bang-Ping
Ji, Shi-Chen
Shen, Xing-Can
author_sort Zhang, Jing-Zi
collection PubMed
description While applying computer simulations to study semiflexible polymers, it is a primary task to determine the persistence length that characterizes the chain stiffness. One frequently asked question concerns the relationship between persistence length and the bending constant of applied bending potential. In this paper, theoretical persistence lengths of polymers with two different bending potentials were analyzed and examined by using lattice Monte Carlo simulations. We found that the persistence length was consistent with theoretical predictions only in bond fluctuation model with cosine squared angle potential. The reason for this is that the theoretical persistence length is calculated according to a continuous bond angle, which is discrete in lattice simulations. In lattice simulations, the theoretical persistence length is larger than that in continuous simulations.
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spelling pubmed-64192242019-04-02 The Persistence Length of Semiflexible Polymers in Lattice Monte Carlo Simulations Zhang, Jing-Zi Peng, Xiang-Yao Liu, Shan Jiang, Bang-Ping Ji, Shi-Chen Shen, Xing-Can Polymers (Basel) Article While applying computer simulations to study semiflexible polymers, it is a primary task to determine the persistence length that characterizes the chain stiffness. One frequently asked question concerns the relationship between persistence length and the bending constant of applied bending potential. In this paper, theoretical persistence lengths of polymers with two different bending potentials were analyzed and examined by using lattice Monte Carlo simulations. We found that the persistence length was consistent with theoretical predictions only in bond fluctuation model with cosine squared angle potential. The reason for this is that the theoretical persistence length is calculated according to a continuous bond angle, which is discrete in lattice simulations. In lattice simulations, the theoretical persistence length is larger than that in continuous simulations. MDPI 2019-02-10 /pmc/articles/PMC6419224/ /pubmed/30960279 http://dx.doi.org/10.3390/polym11020295 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Zhang, Jing-Zi
Peng, Xiang-Yao
Liu, Shan
Jiang, Bang-Ping
Ji, Shi-Chen
Shen, Xing-Can
The Persistence Length of Semiflexible Polymers in Lattice Monte Carlo Simulations
title The Persistence Length of Semiflexible Polymers in Lattice Monte Carlo Simulations
title_full The Persistence Length of Semiflexible Polymers in Lattice Monte Carlo Simulations
title_fullStr The Persistence Length of Semiflexible Polymers in Lattice Monte Carlo Simulations
title_full_unstemmed The Persistence Length of Semiflexible Polymers in Lattice Monte Carlo Simulations
title_short The Persistence Length of Semiflexible Polymers in Lattice Monte Carlo Simulations
title_sort persistence length of semiflexible polymers in lattice monte carlo simulations
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6419224/
https://www.ncbi.nlm.nih.gov/pubmed/30960279
http://dx.doi.org/10.3390/polym11020295
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