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Comparison of hypothesis- and data-driven asthma phenotypes in NHANES 2007–2012: the importance of comprehensive data availability

BACKGROUND: Half of the adults with current asthma among the US National Health and Nutrition Examination Survey (NHANES) participants could be classified in more than one hypothesis-driven phenotype. A data-driven approach applied to the same subjects may allow a more useful classification compared...

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Autores principales: Amaral, Rita, Pereira, Ana M., Jacinto, Tiago, Malinovschi, Andrei, Janson, Christer, Alving, Kjell, Fonseca, João A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6419396/
https://www.ncbi.nlm.nih.gov/pubmed/30918624
http://dx.doi.org/10.1186/s13601-019-0258-7
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author Amaral, Rita
Pereira, Ana M.
Jacinto, Tiago
Malinovschi, Andrei
Janson, Christer
Alving, Kjell
Fonseca, João A.
author_facet Amaral, Rita
Pereira, Ana M.
Jacinto, Tiago
Malinovschi, Andrei
Janson, Christer
Alving, Kjell
Fonseca, João A.
author_sort Amaral, Rita
collection PubMed
description BACKGROUND: Half of the adults with current asthma among the US National Health and Nutrition Examination Survey (NHANES) participants could be classified in more than one hypothesis-driven phenotype. A data-driven approach applied to the same subjects may allow a more useful classification compared to the hypothesis-driven one. AIM: To compare previously defined hypothesis-driven with newly derived data-driven asthma phenotypes, identified by latent class analysis (LCA), in adults with current asthma from NHANES 2007–2012. METHODS: Adults (≥ 18 years) with current asthma from the NHANES were included (n = 1059). LCA included variables commonly used to subdivide asthma. LCA models were derived independently according to age groups: < 40 and ≥ 40 years old. RESULTS: Two data-driven phenotypes were identified among adults with current asthma, for both age groups. The proportions of the hypothesis-driven phenotypes were similar among the two data-driven phenotypes (p > 0.05). Class A < 40 years (n = 285; 75%) and Class A ≥ 40 years (n = 462; 73%), respectively, were characterized by a predominance of highly symptomatic asthma subjects with poor lung function, compared to Class B < 40 years (n = 94; 25%) and Class B ≥ 40 years (n = 170; 27%). Inflammatory biomarkers, smoking status, presence of obesity and hay fever did not markedly differ between the phenotypes. CONCLUSION: Both data- and hypothesis-driven approaches using clinical and physiological variables commonly used to characterize asthma are suboptimal to identify asthma phenotypes among adults from the general population. Further studies based on more comprehensive disease features are required to identify asthma phenotypes in population-based studies. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s13601-019-0258-7) contains supplementary material, which is available to authorized users.
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spelling pubmed-64193962019-03-27 Comparison of hypothesis- and data-driven asthma phenotypes in NHANES 2007–2012: the importance of comprehensive data availability Amaral, Rita Pereira, Ana M. Jacinto, Tiago Malinovschi, Andrei Janson, Christer Alving, Kjell Fonseca, João A. Clin Transl Allergy Research BACKGROUND: Half of the adults with current asthma among the US National Health and Nutrition Examination Survey (NHANES) participants could be classified in more than one hypothesis-driven phenotype. A data-driven approach applied to the same subjects may allow a more useful classification compared to the hypothesis-driven one. AIM: To compare previously defined hypothesis-driven with newly derived data-driven asthma phenotypes, identified by latent class analysis (LCA), in adults with current asthma from NHANES 2007–2012. METHODS: Adults (≥ 18 years) with current asthma from the NHANES were included (n = 1059). LCA included variables commonly used to subdivide asthma. LCA models were derived independently according to age groups: < 40 and ≥ 40 years old. RESULTS: Two data-driven phenotypes were identified among adults with current asthma, for both age groups. The proportions of the hypothesis-driven phenotypes were similar among the two data-driven phenotypes (p > 0.05). Class A < 40 years (n = 285; 75%) and Class A ≥ 40 years (n = 462; 73%), respectively, were characterized by a predominance of highly symptomatic asthma subjects with poor lung function, compared to Class B < 40 years (n = 94; 25%) and Class B ≥ 40 years (n = 170; 27%). Inflammatory biomarkers, smoking status, presence of obesity and hay fever did not markedly differ between the phenotypes. CONCLUSION: Both data- and hypothesis-driven approaches using clinical and physiological variables commonly used to characterize asthma are suboptimal to identify asthma phenotypes among adults from the general population. Further studies based on more comprehensive disease features are required to identify asthma phenotypes in population-based studies. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s13601-019-0258-7) contains supplementary material, which is available to authorized users. BioMed Central 2019-03-13 /pmc/articles/PMC6419396/ /pubmed/30918624 http://dx.doi.org/10.1186/s13601-019-0258-7 Text en © The Author(s) 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research
Amaral, Rita
Pereira, Ana M.
Jacinto, Tiago
Malinovschi, Andrei
Janson, Christer
Alving, Kjell
Fonseca, João A.
Comparison of hypothesis- and data-driven asthma phenotypes in NHANES 2007–2012: the importance of comprehensive data availability
title Comparison of hypothesis- and data-driven asthma phenotypes in NHANES 2007–2012: the importance of comprehensive data availability
title_full Comparison of hypothesis- and data-driven asthma phenotypes in NHANES 2007–2012: the importance of comprehensive data availability
title_fullStr Comparison of hypothesis- and data-driven asthma phenotypes in NHANES 2007–2012: the importance of comprehensive data availability
title_full_unstemmed Comparison of hypothesis- and data-driven asthma phenotypes in NHANES 2007–2012: the importance of comprehensive data availability
title_short Comparison of hypothesis- and data-driven asthma phenotypes in NHANES 2007–2012: the importance of comprehensive data availability
title_sort comparison of hypothesis- and data-driven asthma phenotypes in nhanes 2007–2012: the importance of comprehensive data availability
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6419396/
https://www.ncbi.nlm.nih.gov/pubmed/30918624
http://dx.doi.org/10.1186/s13601-019-0258-7
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