Cargando…
FastSpar: rapid and scalable correlation estimation for compositional data
SUMMARY: A common goal of microbiome studies is the elucidation of community composition and member interactions using counts of taxonomic units extracted from sequence data. Inference of interaction networks from sparse and compositional data requires specialized statistical approaches. A popular s...
Autores principales: | Watts, Stephen C, Ritchie, Scott C, Inouye, Michael, Holt, Kathryn E |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6419895/ https://www.ncbi.nlm.nih.gov/pubmed/30169561 http://dx.doi.org/10.1093/bioinformatics/bty734 |
Ejemplares similares
-
READSCAN: a fast and scalable pathogen discovery program with accurate genome
relative abundance estimation
por: Naeem, Raeece, et al.
Publicado: (2013) -
Pharokka: a fast scalable bacteriophage annotation tool
por: Bouras, George, et al.
Publicado: (2022) -
pyPESTO: a modular and scalable tool for parameter estimation for dynamic models
por: Schälte, Yannik, et al.
Publicado: (2023) -
RAxML-NG: a fast, scalable and user-friendly tool for maximum likelihood phylogenetic inference
por: Kozlov, Alexey M, et al.
Publicado: (2019) -
Hi-Corrector: a fast, scalable and memory-efficient package for normalizing large-scale Hi-C data
por: Li, Wenyuan, et al.
Publicado: (2015)