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Entropic effects in cell lineage tree packings

Optimal packings [1, 2] of unconnected objects have been studied for centuries [3–6], but the packing principles of linked objects, such as topologically complex polymers [7, 8] or cell lineages [9, 10], are yet to be fully explored. Here, we identify and investigate a generic class of geometrically...

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Autores principales: Alsous, Jasmin Imran, Villoutreix, Paul, Stoop, Norbert, Shvartsman, Stanislav Y., Dunkel, Jӧrn
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6419958/
https://www.ncbi.nlm.nih.gov/pubmed/30881478
http://dx.doi.org/10.1038/s41567-018-0202-0
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author Alsous, Jasmin Imran
Villoutreix, Paul
Stoop, Norbert
Shvartsman, Stanislav Y.
Dunkel, Jӧrn
author_facet Alsous, Jasmin Imran
Villoutreix, Paul
Stoop, Norbert
Shvartsman, Stanislav Y.
Dunkel, Jӧrn
author_sort Alsous, Jasmin Imran
collection PubMed
description Optimal packings [1, 2] of unconnected objects have been studied for centuries [3–6], but the packing principles of linked objects, such as topologically complex polymers [7, 8] or cell lineages [9, 10], are yet to be fully explored. Here, we identify and investigate a generic class of geometrically frustrated tree packing problems, arising during the initial stages of animal development when interconnected cells assemble within a convex enclosure [10]. Using a combination of 3D imaging, computational image analysis, and mathematical modelling, we study the tree packing problem in Drosophila egg chambers, where 16 germline cells are linked by cytoplasmic bridges to form a branched tree. Our imaging data reveal non-uniformly distributed tree packings, in agreement with predictions from energy-based computations. This departure from uniformity is entropic and affects cell organization during the first stages of the animal’s development. Considering mathematical models of increasing complexity, we investigate spherically confined tree packing problems on convex polyhedrons [11] that generalize Platonic and Archimedean solids. Our experimental and theoretical results provide a basis for understanding the principles that govern positional ordering in linked multicellular structures, with implications for tissue organization and dynamics [12, 13].
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spelling pubmed-64199582019-03-15 Entropic effects in cell lineage tree packings Alsous, Jasmin Imran Villoutreix, Paul Stoop, Norbert Shvartsman, Stanislav Y. Dunkel, Jӧrn Nat Phys Article Optimal packings [1, 2] of unconnected objects have been studied for centuries [3–6], but the packing principles of linked objects, such as topologically complex polymers [7, 8] or cell lineages [9, 10], are yet to be fully explored. Here, we identify and investigate a generic class of geometrically frustrated tree packing problems, arising during the initial stages of animal development when interconnected cells assemble within a convex enclosure [10]. Using a combination of 3D imaging, computational image analysis, and mathematical modelling, we study the tree packing problem in Drosophila egg chambers, where 16 germline cells are linked by cytoplasmic bridges to form a branched tree. Our imaging data reveal non-uniformly distributed tree packings, in agreement with predictions from energy-based computations. This departure from uniformity is entropic and affects cell organization during the first stages of the animal’s development. Considering mathematical models of increasing complexity, we investigate spherically confined tree packing problems on convex polyhedrons [11] that generalize Platonic and Archimedean solids. Our experimental and theoretical results provide a basis for understanding the principles that govern positional ordering in linked multicellular structures, with implications for tissue organization and dynamics [12, 13]. 2018-07-16 2018-10 /pmc/articles/PMC6419958/ /pubmed/30881478 http://dx.doi.org/10.1038/s41567-018-0202-0 Text en Users may view, print, copy, and download text and data-mine the content in such documents, for the purposes of academic research, subject always to the full Conditions of use:http://www.nature.com/authors/editorial_policies/license.html#terms
spellingShingle Article
Alsous, Jasmin Imran
Villoutreix, Paul
Stoop, Norbert
Shvartsman, Stanislav Y.
Dunkel, Jӧrn
Entropic effects in cell lineage tree packings
title Entropic effects in cell lineage tree packings
title_full Entropic effects in cell lineage tree packings
title_fullStr Entropic effects in cell lineage tree packings
title_full_unstemmed Entropic effects in cell lineage tree packings
title_short Entropic effects in cell lineage tree packings
title_sort entropic effects in cell lineage tree packings
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6419958/
https://www.ncbi.nlm.nih.gov/pubmed/30881478
http://dx.doi.org/10.1038/s41567-018-0202-0
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