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Near real-time enumeration of live and dead bacteria using a fibre-based spectroscopic device

A rapid, cost-effective and easy method that allows on-site determination of the concentration of live and dead bacterial cells using a fibre-based spectroscopic device (the optrode system) is proposed and demonstrated. Identification of live and dead bacteria was achieved by using the commercially...

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Detalles Bibliográficos
Autores principales: Ou, Fang, McGoverin, Cushla, Swift, Simon, Vanholsbeeck, Frédérique
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6423134/
https://www.ncbi.nlm.nih.gov/pubmed/30886183
http://dx.doi.org/10.1038/s41598-019-41221-1
Descripción
Sumario:A rapid, cost-effective and easy method that allows on-site determination of the concentration of live and dead bacterial cells using a fibre-based spectroscopic device (the optrode system) is proposed and demonstrated. Identification of live and dead bacteria was achieved by using the commercially available dyes SYTO 9 and propidium iodide, and fluorescence spectra were measured by the optrode. Three spectral processing methods were evaluated for their effectiveness in predicting the original bacterial concentration in the samples: principal components regression (PCR), partial least squares regression (PLSR) and support vector regression (SVR). Without any sample pre-concentration, PCR achieved the most reliable results. It was able to quantify live bacteria from 10(8) down to 10(6.2) bacteria/mL and showed the potential to detect as low as 10(5.7) bacteria/mL. Meanwhile, enumeration of dead bacteria using PCR was achieved between 10(8) and 10(7) bacteria/mL. The general procedures described in this article can be applied or modified for the enumeration of bacteria within populations stained with fluorescent dyes. The optrode is a promising device for the enumeration of live and dead bacterial populations particularly where rapid, on-site measurement and analysis is required.