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On the functional characterization of lytic polysaccharide monooxygenases (LPMOs)

Lytic polysaccharide monooxygenases (LPMOs) are abundant in nature and best known for their role in the enzymatic conversion of recalcitrant polysaccharides such as chitin and cellulose. LPMO activity requires an oxygen co-substrate, which was originally thought to be O(2), but which may also be H(2...

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Autores principales: Eijsink, Vincent G. H., Petrovic, Dejan, Forsberg, Zarah, Mekasha, Sophanit, Røhr, Åsmund K., Várnai, Anikó, Bissaro, Bastien, Vaaje-Kolstad, Gustav
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6423801/
https://www.ncbi.nlm.nih.gov/pubmed/30923566
http://dx.doi.org/10.1186/s13068-019-1392-0
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author Eijsink, Vincent G. H.
Petrovic, Dejan
Forsberg, Zarah
Mekasha, Sophanit
Røhr, Åsmund K.
Várnai, Anikó
Bissaro, Bastien
Vaaje-Kolstad, Gustav
author_facet Eijsink, Vincent G. H.
Petrovic, Dejan
Forsberg, Zarah
Mekasha, Sophanit
Røhr, Åsmund K.
Várnai, Anikó
Bissaro, Bastien
Vaaje-Kolstad, Gustav
author_sort Eijsink, Vincent G. H.
collection PubMed
description Lytic polysaccharide monooxygenases (LPMOs) are abundant in nature and best known for their role in the enzymatic conversion of recalcitrant polysaccharides such as chitin and cellulose. LPMO activity requires an oxygen co-substrate, which was originally thought to be O(2), but which may also be H(2)O(2). Functional characterization of LPMOs is not straightforward because typical reaction mixtures will promote side reactions, including auto-catalytic inactivation of the enzyme. For example, despite some recent progress, there is still limited insight into the kinetics of the LPMO reaction. Recent discoveries concerning the role of H(2)O(2) in LPMO catalysis further complicate the picture. Here, we review commonly used methods for characterizing LPMOs, with focus on benefits and potential pitfalls, rather than on technical details. We conclude by pointing at a few key problems and potential misconceptions that should be taken into account when interpreting existing data and planning future experiments.
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spelling pubmed-64238012019-03-28 On the functional characterization of lytic polysaccharide monooxygenases (LPMOs) Eijsink, Vincent G. H. Petrovic, Dejan Forsberg, Zarah Mekasha, Sophanit Røhr, Åsmund K. Várnai, Anikó Bissaro, Bastien Vaaje-Kolstad, Gustav Biotechnol Biofuels Review Lytic polysaccharide monooxygenases (LPMOs) are abundant in nature and best known for their role in the enzymatic conversion of recalcitrant polysaccharides such as chitin and cellulose. LPMO activity requires an oxygen co-substrate, which was originally thought to be O(2), but which may also be H(2)O(2). Functional characterization of LPMOs is not straightforward because typical reaction mixtures will promote side reactions, including auto-catalytic inactivation of the enzyme. For example, despite some recent progress, there is still limited insight into the kinetics of the LPMO reaction. Recent discoveries concerning the role of H(2)O(2) in LPMO catalysis further complicate the picture. Here, we review commonly used methods for characterizing LPMOs, with focus on benefits and potential pitfalls, rather than on technical details. We conclude by pointing at a few key problems and potential misconceptions that should be taken into account when interpreting existing data and planning future experiments. BioMed Central 2019-03-19 /pmc/articles/PMC6423801/ /pubmed/30923566 http://dx.doi.org/10.1186/s13068-019-1392-0 Text en © The Author(s) 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Review
Eijsink, Vincent G. H.
Petrovic, Dejan
Forsberg, Zarah
Mekasha, Sophanit
Røhr, Åsmund K.
Várnai, Anikó
Bissaro, Bastien
Vaaje-Kolstad, Gustav
On the functional characterization of lytic polysaccharide monooxygenases (LPMOs)
title On the functional characterization of lytic polysaccharide monooxygenases (LPMOs)
title_full On the functional characterization of lytic polysaccharide monooxygenases (LPMOs)
title_fullStr On the functional characterization of lytic polysaccharide monooxygenases (LPMOs)
title_full_unstemmed On the functional characterization of lytic polysaccharide monooxygenases (LPMOs)
title_short On the functional characterization of lytic polysaccharide monooxygenases (LPMOs)
title_sort on the functional characterization of lytic polysaccharide monooxygenases (lpmos)
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6423801/
https://www.ncbi.nlm.nih.gov/pubmed/30923566
http://dx.doi.org/10.1186/s13068-019-1392-0
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