Cargando…

Strong increase of true and false positive mycobacterial cultures sent to the National Reference Centre in Belgium, 2007 to 2016

INTRODUCTION: In 2007, a new federal legislation in Belgium prohibited non-biosafety level 3 laboratories to process culture tubes suspected of containing mycobacteria. AIM: To present mycobacterial surveillance/diagnosis data from the Belgian National Reference Centre for mycobacteria (NRC) from 20...

Descripción completa

Detalles Bibliográficos
Autores principales: Soetaert, Karine, Subissi, Lorenzo, Ceyssens, Pieter-Jan, Vanfleteren, Brigitte, Chantrenne, Marianne, Asikainen, Tommi, Duysburgh, Els, Mathys, Vanessa
Formato: Online Artículo Texto
Lenguaje:English
Publicado: European Centre for Disease Prevention and Control (ECDC) 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6425549/
https://www.ncbi.nlm.nih.gov/pubmed/30892180
http://dx.doi.org/10.2807/1560-7917.ES.2019.24.11.1800205
_version_ 1783404857709821952
author Soetaert, Karine
Subissi, Lorenzo
Ceyssens, Pieter-Jan
Vanfleteren, Brigitte
Chantrenne, Marianne
Asikainen, Tommi
Duysburgh, Els
Mathys, Vanessa
author_facet Soetaert, Karine
Subissi, Lorenzo
Ceyssens, Pieter-Jan
Vanfleteren, Brigitte
Chantrenne, Marianne
Asikainen, Tommi
Duysburgh, Els
Mathys, Vanessa
author_sort Soetaert, Karine
collection PubMed
description INTRODUCTION: In 2007, a new federal legislation in Belgium prohibited non-biosafety level 3 laboratories to process culture tubes suspected of containing mycobacteria. AIM: To present mycobacterial surveillance/diagnosis data from the Belgian National Reference Centre for mycobacteria (NRC) from 2007 to 2016. METHODS: This retrospective observational study investigated the numbers of analyses at the NRC and false positive cultures (interpreted as containing mycobacteria at referring clinical laboratories, but with no mycobacterial DNA detected by PCR in the NRC). We reviewed mycobacterial species identified and assessed trends over time of proportions of nontuberculous mycobacteria (NTM) vs Mycobacterium tuberculosis complex (MTBc), and false positive cultures vs NTM. RESULTS: From 2007 to 2016, analyses requests to the NRC doubled from 12.6 to 25.3 per 100,000 inhabitants. A small but significant increase occurred in NTM vs MTBc proportions, from 57.9% (587/1,014) to 60.3% (867/1,437) (p < 0.001). Although NTM infection notification is not mandatory in Belgium, we annually received up to 8.6 NTM per 100,000 inhabitants. M. avium predominated (ca 20% of NTM cultures), but M. intracellulare culture numbers rose significantly, from 13.0% (74/587) of NTM cultures in 2007 to 21.0% (178/867) in 2016 (RR: 1.05; 95% CI: 1.03–1.07). The number of false positive cultures also increased, reaching 43.3% (1,097/2,534) of all samples in 2016. CONCLUSION: We recommend inclusion of NTM in sentinel programmes. The large increase of false positive cultures is hypothesised to result from processing issues prior to arrival at the NRC, highlighting the importance of sample decontamination/transport and equipment calibration in peripheral laboratories.
format Online
Article
Text
id pubmed-6425549
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher European Centre for Disease Prevention and Control (ECDC)
record_format MEDLINE/PubMed
spelling pubmed-64255492019-04-17 Strong increase of true and false positive mycobacterial cultures sent to the National Reference Centre in Belgium, 2007 to 2016 Soetaert, Karine Subissi, Lorenzo Ceyssens, Pieter-Jan Vanfleteren, Brigitte Chantrenne, Marianne Asikainen, Tommi Duysburgh, Els Mathys, Vanessa Euro Surveill Research INTRODUCTION: In 2007, a new federal legislation in Belgium prohibited non-biosafety level 3 laboratories to process culture tubes suspected of containing mycobacteria. AIM: To present mycobacterial surveillance/diagnosis data from the Belgian National Reference Centre for mycobacteria (NRC) from 2007 to 2016. METHODS: This retrospective observational study investigated the numbers of analyses at the NRC and false positive cultures (interpreted as containing mycobacteria at referring clinical laboratories, but with no mycobacterial DNA detected by PCR in the NRC). We reviewed mycobacterial species identified and assessed trends over time of proportions of nontuberculous mycobacteria (NTM) vs Mycobacterium tuberculosis complex (MTBc), and false positive cultures vs NTM. RESULTS: From 2007 to 2016, analyses requests to the NRC doubled from 12.6 to 25.3 per 100,000 inhabitants. A small but significant increase occurred in NTM vs MTBc proportions, from 57.9% (587/1,014) to 60.3% (867/1,437) (p < 0.001). Although NTM infection notification is not mandatory in Belgium, we annually received up to 8.6 NTM per 100,000 inhabitants. M. avium predominated (ca 20% of NTM cultures), but M. intracellulare culture numbers rose significantly, from 13.0% (74/587) of NTM cultures in 2007 to 21.0% (178/867) in 2016 (RR: 1.05; 95% CI: 1.03–1.07). The number of false positive cultures also increased, reaching 43.3% (1,097/2,534) of all samples in 2016. CONCLUSION: We recommend inclusion of NTM in sentinel programmes. The large increase of false positive cultures is hypothesised to result from processing issues prior to arrival at the NRC, highlighting the importance of sample decontamination/transport and equipment calibration in peripheral laboratories. European Centre for Disease Prevention and Control (ECDC) 2019-03-14 /pmc/articles/PMC6425549/ /pubmed/30892180 http://dx.doi.org/10.2807/1560-7917.ES.2019.24.11.1800205 Text en This article is copyright of the authors or their affiliated institutions, 2019. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC BY 4.0) Licence. You may share and adapt the material, but must give appropriate credit to the source, provide a link to the licence, and indicate if changes were made.
spellingShingle Research
Soetaert, Karine
Subissi, Lorenzo
Ceyssens, Pieter-Jan
Vanfleteren, Brigitte
Chantrenne, Marianne
Asikainen, Tommi
Duysburgh, Els
Mathys, Vanessa
Strong increase of true and false positive mycobacterial cultures sent to the National Reference Centre in Belgium, 2007 to 2016
title Strong increase of true and false positive mycobacterial cultures sent to the National Reference Centre in Belgium, 2007 to 2016
title_full Strong increase of true and false positive mycobacterial cultures sent to the National Reference Centre in Belgium, 2007 to 2016
title_fullStr Strong increase of true and false positive mycobacterial cultures sent to the National Reference Centre in Belgium, 2007 to 2016
title_full_unstemmed Strong increase of true and false positive mycobacterial cultures sent to the National Reference Centre in Belgium, 2007 to 2016
title_short Strong increase of true and false positive mycobacterial cultures sent to the National Reference Centre in Belgium, 2007 to 2016
title_sort strong increase of true and false positive mycobacterial cultures sent to the national reference centre in belgium, 2007 to 2016
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6425549/
https://www.ncbi.nlm.nih.gov/pubmed/30892180
http://dx.doi.org/10.2807/1560-7917.ES.2019.24.11.1800205
work_keys_str_mv AT soetaertkarine strongincreaseoftrueandfalsepositivemycobacterialculturessenttothenationalreferencecentreinbelgium2007to2016
AT subissilorenzo strongincreaseoftrueandfalsepositivemycobacterialculturessenttothenationalreferencecentreinbelgium2007to2016
AT ceyssenspieterjan strongincreaseoftrueandfalsepositivemycobacterialculturessenttothenationalreferencecentreinbelgium2007to2016
AT vanfleterenbrigitte strongincreaseoftrueandfalsepositivemycobacterialculturessenttothenationalreferencecentreinbelgium2007to2016
AT chantrennemarianne strongincreaseoftrueandfalsepositivemycobacterialculturessenttothenationalreferencecentreinbelgium2007to2016
AT asikainentommi strongincreaseoftrueandfalsepositivemycobacterialculturessenttothenationalreferencecentreinbelgium2007to2016
AT duysburghels strongincreaseoftrueandfalsepositivemycobacterialculturessenttothenationalreferencecentreinbelgium2007to2016
AT mathysvanessa strongincreaseoftrueandfalsepositivemycobacterialculturessenttothenationalreferencecentreinbelgium2007to2016