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Structure and Diversity of Soil Bacterial Communities in Offshore Islands
The effects of biogeographical separation and parent material differences in soil bacterial structure and diversity in offshore islands remain poorly understood. In the current study, we used next-generation sequencing to characterize the differences in soil bacterial communities in five offshore su...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6426884/ https://www.ncbi.nlm.nih.gov/pubmed/30894580 http://dx.doi.org/10.1038/s41598-019-41170-9 |
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author | Lin, Yu-Te Lin, Yu-Fei Tsai, Isheng J. Chang, Ed-Haun Jien, Shih-Hao Lin, Yen-Ju Chiu, Chih-Yu |
author_facet | Lin, Yu-Te Lin, Yu-Fei Tsai, Isheng J. Chang, Ed-Haun Jien, Shih-Hao Lin, Yen-Ju Chiu, Chih-Yu |
author_sort | Lin, Yu-Te |
collection | PubMed |
description | The effects of biogeographical separation and parent material differences in soil bacterial structure and diversity in offshore islands remain poorly understood. In the current study, we used next-generation sequencing to characterize the differences in soil bacterial communities in five offshore subtropical granite islands (Matsu Islets, MI) of mainland China and two offshore tropical andesite islands (Orchid [OI] and Green Islands [GI]) of Taiwan. The soils of OI and GI were more acidic and had higher organic carbon and total nitrogen content than MI soils. The bacterial communities were dominated by Acidobacteria and Proteobacteria but had different relative abundance because soils were derived from different parent material and because of geographic distance. Non-metric multi-dimensional scaling revealed that the communities formed different clusters among different parent material and geographically distributed soils. The alpha-diversity in bacterial communities was higher in tropical than subtropical soils. Mantel test and redundancy analysis indicated that bacterial diversity and compositions of OI and GI soils, respectively, were positively correlated with soil pH, organic carbon, total nitrogen, microbial biomass carbon and nitrogen. These results suggest that variations in soil properties of offshore islands could result from differences in soil parent material. Distinct soils derived from different parent material and geographic distance could in turn alter the bacterial communities. |
format | Online Article Text |
id | pubmed-6426884 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-64268842019-03-28 Structure and Diversity of Soil Bacterial Communities in Offshore Islands Lin, Yu-Te Lin, Yu-Fei Tsai, Isheng J. Chang, Ed-Haun Jien, Shih-Hao Lin, Yen-Ju Chiu, Chih-Yu Sci Rep Article The effects of biogeographical separation and parent material differences in soil bacterial structure and diversity in offshore islands remain poorly understood. In the current study, we used next-generation sequencing to characterize the differences in soil bacterial communities in five offshore subtropical granite islands (Matsu Islets, MI) of mainland China and two offshore tropical andesite islands (Orchid [OI] and Green Islands [GI]) of Taiwan. The soils of OI and GI were more acidic and had higher organic carbon and total nitrogen content than MI soils. The bacterial communities were dominated by Acidobacteria and Proteobacteria but had different relative abundance because soils were derived from different parent material and because of geographic distance. Non-metric multi-dimensional scaling revealed that the communities formed different clusters among different parent material and geographically distributed soils. The alpha-diversity in bacterial communities was higher in tropical than subtropical soils. Mantel test and redundancy analysis indicated that bacterial diversity and compositions of OI and GI soils, respectively, were positively correlated with soil pH, organic carbon, total nitrogen, microbial biomass carbon and nitrogen. These results suggest that variations in soil properties of offshore islands could result from differences in soil parent material. Distinct soils derived from different parent material and geographic distance could in turn alter the bacterial communities. Nature Publishing Group UK 2019-03-20 /pmc/articles/PMC6426884/ /pubmed/30894580 http://dx.doi.org/10.1038/s41598-019-41170-9 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Lin, Yu-Te Lin, Yu-Fei Tsai, Isheng J. Chang, Ed-Haun Jien, Shih-Hao Lin, Yen-Ju Chiu, Chih-Yu Structure and Diversity of Soil Bacterial Communities in Offshore Islands |
title | Structure and Diversity of Soil Bacterial Communities in Offshore Islands |
title_full | Structure and Diversity of Soil Bacterial Communities in Offshore Islands |
title_fullStr | Structure and Diversity of Soil Bacterial Communities in Offshore Islands |
title_full_unstemmed | Structure and Diversity of Soil Bacterial Communities in Offshore Islands |
title_short | Structure and Diversity of Soil Bacterial Communities in Offshore Islands |
title_sort | structure and diversity of soil bacterial communities in offshore islands |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6426884/ https://www.ncbi.nlm.nih.gov/pubmed/30894580 http://dx.doi.org/10.1038/s41598-019-41170-9 |
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