Cargando…

Too many tags spoil the metadata: investigating the knowledge management of scientific research with semantic web technologies

Scientific research is increasingly characterised by the volume of documents and data that it produces, from experimental plans and raw data to reports and papers. Researchers frequently struggle to manage and curate these materials, both individually and collectively. Previous studies of Electronic...

Descripción completa

Detalles Bibliográficos
Autores principales: Kanza, Samantha, Gibbins, Nicholas, Frey, Jeremy G.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer International Publishing 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6427892/
https://www.ncbi.nlm.nih.gov/pubmed/30900066
http://dx.doi.org/10.1186/s13321-019-0345-8
_version_ 1783405313093795840
author Kanza, Samantha
Gibbins, Nicholas
Frey, Jeremy G.
author_facet Kanza, Samantha
Gibbins, Nicholas
Frey, Jeremy G.
author_sort Kanza, Samantha
collection PubMed
description Scientific research is increasingly characterised by the volume of documents and data that it produces, from experimental plans and raw data to reports and papers. Researchers frequently struggle to manage and curate these materials, both individually and collectively. Previous studies of Electronic Lab Notebooks (ELNs) in academia and industry have identified semantic web technologies as a means for organising scientific documents to improve current workflows and knowledge management practices. In this paper, we present a qualitative, user-centred study of researcher requirements and practices, based on a series of discipline-specific focus groups. We developed a prototype semantic ELN to serve as a discussion aid for these focus groups, and to help us explore the technical readiness of a range of semantic web technologies. While these technologies showed potential, existing tools for semantic annotation were not well-received by our focus groups, and need to be refined before they can be used to enhance current researcher practices. In addition, the seemingly simple notion of “tagging and searching” documents appears anything but; the researchers in our focus groups had extremely personal requirements for how they organise their work, so the successful incorporation of semantic web technologies into their practices must permit a significant degree of customisation and personalisation. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s13321-019-0345-8) contains supplementary material, which is available to authorized users.
format Online
Article
Text
id pubmed-6427892
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Springer International Publishing
record_format MEDLINE/PubMed
spelling pubmed-64278922019-04-01 Too many tags spoil the metadata: investigating the knowledge management of scientific research with semantic web technologies Kanza, Samantha Gibbins, Nicholas Frey, Jeremy G. J Cheminform Research Article Scientific research is increasingly characterised by the volume of documents and data that it produces, from experimental plans and raw data to reports and papers. Researchers frequently struggle to manage and curate these materials, both individually and collectively. Previous studies of Electronic Lab Notebooks (ELNs) in academia and industry have identified semantic web technologies as a means for organising scientific documents to improve current workflows and knowledge management practices. In this paper, we present a qualitative, user-centred study of researcher requirements and practices, based on a series of discipline-specific focus groups. We developed a prototype semantic ELN to serve as a discussion aid for these focus groups, and to help us explore the technical readiness of a range of semantic web technologies. While these technologies showed potential, existing tools for semantic annotation were not well-received by our focus groups, and need to be refined before they can be used to enhance current researcher practices. In addition, the seemingly simple notion of “tagging and searching” documents appears anything but; the researchers in our focus groups had extremely personal requirements for how they organise their work, so the successful incorporation of semantic web technologies into their practices must permit a significant degree of customisation and personalisation. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s13321-019-0345-8) contains supplementary material, which is available to authorized users. Springer International Publishing 2019-03-21 /pmc/articles/PMC6427892/ /pubmed/30900066 http://dx.doi.org/10.1186/s13321-019-0345-8 Text en © The Author(s) 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research Article
Kanza, Samantha
Gibbins, Nicholas
Frey, Jeremy G.
Too many tags spoil the metadata: investigating the knowledge management of scientific research with semantic web technologies
title Too many tags spoil the metadata: investigating the knowledge management of scientific research with semantic web technologies
title_full Too many tags spoil the metadata: investigating the knowledge management of scientific research with semantic web technologies
title_fullStr Too many tags spoil the metadata: investigating the knowledge management of scientific research with semantic web technologies
title_full_unstemmed Too many tags spoil the metadata: investigating the knowledge management of scientific research with semantic web technologies
title_short Too many tags spoil the metadata: investigating the knowledge management of scientific research with semantic web technologies
title_sort too many tags spoil the metadata: investigating the knowledge management of scientific research with semantic web technologies
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6427892/
https://www.ncbi.nlm.nih.gov/pubmed/30900066
http://dx.doi.org/10.1186/s13321-019-0345-8
work_keys_str_mv AT kanzasamantha toomanytagsspoilthemetadatainvestigatingtheknowledgemanagementofscientificresearchwithsemanticwebtechnologies
AT gibbinsnicholas toomanytagsspoilthemetadatainvestigatingtheknowledgemanagementofscientificresearchwithsemanticwebtechnologies
AT freyjeremyg toomanytagsspoilthemetadatainvestigatingtheknowledgemanagementofscientificresearchwithsemanticwebtechnologies