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Genome sequence of the H(2)-producing Clostridium beijerinckii strain Br21 isolated from a sugarcane vinasse treatment plant
We report on the nearly complete genome sequence of Clostridium beijerinckii strain Br21, formerly isolated from a sugarcarne vinasse wastewater treatment plant. The resulting genome is ca. 5.9 Mbp in length and resembles the size of previously published C. beijerinckii genomes. We annotated the gen...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Sociedade Brasileira de Genética
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6428130/ https://www.ncbi.nlm.nih.gov/pubmed/30730526 http://dx.doi.org/10.1590/1678-4685-GMB-2017-0315 |
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author | Fonseca, Bruna Constante Riaño-Pachón, Diego Mauricio Guazzaroni, María-Eugenia Reginatto, Valeria |
author_facet | Fonseca, Bruna Constante Riaño-Pachón, Diego Mauricio Guazzaroni, María-Eugenia Reginatto, Valeria |
author_sort | Fonseca, Bruna Constante |
collection | PubMed |
description | We report on the nearly complete genome sequence of Clostridium beijerinckii strain Br21, formerly isolated from a sugarcarne vinasse wastewater treatment plant. The resulting genome is ca. 5.9 Mbp in length and resembles the size of previously published C. beijerinckii genomes. We annotated the genome sequence and predicted a total of 5323 genes. Strain Br21 has a genetic toolkit that allows it to exploit diverse sugars that are often found after lignocellulosic biomass pretreatment to yield products of commercial interest. Besides the whole set of genes encoding for enzymes underlying hydrogen production, the genome of the new strain includes genes that enable carbon sources conversion into butanol, ethanol, acetic acid, butyric acid, and the chemical block 1,3-propanediol, which is used to obtain polymers. Moreover, the genome of strain Br21 has a higher number of ORFs with predicted beta-glucosidase activity as compared to other C. beijerinckii strains described in the KEGG database. These characteristics make C. beijerinckii strain Br21 a remarkable candidate for direct use in biotechnological processes and attest that it is a potential biocatalyst supplier. |
format | Online Article Text |
id | pubmed-6428130 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Sociedade Brasileira de Genética |
record_format | MEDLINE/PubMed |
spelling | pubmed-64281302019-04-16 Genome sequence of the H(2)-producing Clostridium beijerinckii strain Br21 isolated from a sugarcane vinasse treatment plant Fonseca, Bruna Constante Riaño-Pachón, Diego Mauricio Guazzaroni, María-Eugenia Reginatto, Valeria Genet Mol Biol Genomics and Bioinformatics We report on the nearly complete genome sequence of Clostridium beijerinckii strain Br21, formerly isolated from a sugarcarne vinasse wastewater treatment plant. The resulting genome is ca. 5.9 Mbp in length and resembles the size of previously published C. beijerinckii genomes. We annotated the genome sequence and predicted a total of 5323 genes. Strain Br21 has a genetic toolkit that allows it to exploit diverse sugars that are often found after lignocellulosic biomass pretreatment to yield products of commercial interest. Besides the whole set of genes encoding for enzymes underlying hydrogen production, the genome of the new strain includes genes that enable carbon sources conversion into butanol, ethanol, acetic acid, butyric acid, and the chemical block 1,3-propanediol, which is used to obtain polymers. Moreover, the genome of strain Br21 has a higher number of ORFs with predicted beta-glucosidase activity as compared to other C. beijerinckii strains described in the KEGG database. These characteristics make C. beijerinckii strain Br21 a remarkable candidate for direct use in biotechnological processes and attest that it is a potential biocatalyst supplier. Sociedade Brasileira de Genética 2019-01-31 2019 /pmc/articles/PMC6428130/ /pubmed/30730526 http://dx.doi.org/10.1590/1678-4685-GMB-2017-0315 Text en Copyright © 2018, Sociedade Brasileira de Genética. https://creativecommons.org/licenses/by/4.0/ License information: This is an open-access article distributed under the terms of the Creative Commons Attribution License (type CC-BY), which permits unrestricted use, distribution and reproduction in any medium, provided the original article is properly cited. |
spellingShingle | Genomics and Bioinformatics Fonseca, Bruna Constante Riaño-Pachón, Diego Mauricio Guazzaroni, María-Eugenia Reginatto, Valeria Genome sequence of the H(2)-producing Clostridium beijerinckii strain Br21 isolated from a sugarcane vinasse treatment plant |
title | Genome sequence of the H(2)-producing Clostridium
beijerinckii strain Br21 isolated from a sugarcane vinasse
treatment plant |
title_full | Genome sequence of the H(2)-producing Clostridium
beijerinckii strain Br21 isolated from a sugarcane vinasse
treatment plant |
title_fullStr | Genome sequence of the H(2)-producing Clostridium
beijerinckii strain Br21 isolated from a sugarcane vinasse
treatment plant |
title_full_unstemmed | Genome sequence of the H(2)-producing Clostridium
beijerinckii strain Br21 isolated from a sugarcane vinasse
treatment plant |
title_short | Genome sequence of the H(2)-producing Clostridium
beijerinckii strain Br21 isolated from a sugarcane vinasse
treatment plant |
title_sort | genome sequence of the h(2)-producing clostridium
beijerinckii strain br21 isolated from a sugarcane vinasse
treatment plant |
topic | Genomics and Bioinformatics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6428130/ https://www.ncbi.nlm.nih.gov/pubmed/30730526 http://dx.doi.org/10.1590/1678-4685-GMB-2017-0315 |
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