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Development and use of a flexible data harmonization platform to facilitate the harmonization of individual patient data for meta-analyses

OBJECTIVE: Harmonizing individual patient data (IPD) for meta-analysis has clinical and statistical advantages. Harmonizing IPD from multiple studies may benefit from a flexible data harmonization platform (DHP) that allows harmonization of IPD already during data collection. This paper describes th...

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Autores principales: Kalter, Joeri, Sweegers, Maike G., Verdonck-de Leeuw, Irma M., Brug, Johannes, Buffart, Laurien M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6431032/
https://www.ncbi.nlm.nih.gov/pubmed/30902064
http://dx.doi.org/10.1186/s13104-019-4210-7
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author Kalter, Joeri
Sweegers, Maike G.
Verdonck-de Leeuw, Irma M.
Brug, Johannes
Buffart, Laurien M.
author_facet Kalter, Joeri
Sweegers, Maike G.
Verdonck-de Leeuw, Irma M.
Brug, Johannes
Buffart, Laurien M.
author_sort Kalter, Joeri
collection PubMed
description OBJECTIVE: Harmonizing individual patient data (IPD) for meta-analysis has clinical and statistical advantages. Harmonizing IPD from multiple studies may benefit from a flexible data harmonization platform (DHP) that allows harmonization of IPD already during data collection. This paper describes the development and use of a flexible DHP that was initially developed for the Predicting OptimaL cAncer RehabIlitation and Supportive care (POLARIS) study. RESULTS: The DHP that we developed (I) allows IPD harmonization with a flexible approach, (II) has the ability to store data in a centralized and secured database server with large capacity, (III) is transparent and easy in use, and (IV) has the ability to export harmonized IPD and corresponding data dictionary to a statistical program. The DHP uses Microsoft Access as front-end application and requires a relational database management system such as Microsoft Structured Query Language (SQL) Server or MySQL as back-end application. The DHP consists of five user friendly interfaces which support the user to import original study data, to harmonize the data with a master data dictionary, and to export the harmonized data into a statistical software program of choice for further analyses. The DHP is now also adopted in two other studies. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s13104-019-4210-7) contains supplementary material, which is available to authorized users.
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spelling pubmed-64310322019-04-04 Development and use of a flexible data harmonization platform to facilitate the harmonization of individual patient data for meta-analyses Kalter, Joeri Sweegers, Maike G. Verdonck-de Leeuw, Irma M. Brug, Johannes Buffart, Laurien M. BMC Res Notes Research Note OBJECTIVE: Harmonizing individual patient data (IPD) for meta-analysis has clinical and statistical advantages. Harmonizing IPD from multiple studies may benefit from a flexible data harmonization platform (DHP) that allows harmonization of IPD already during data collection. This paper describes the development and use of a flexible DHP that was initially developed for the Predicting OptimaL cAncer RehabIlitation and Supportive care (POLARIS) study. RESULTS: The DHP that we developed (I) allows IPD harmonization with a flexible approach, (II) has the ability to store data in a centralized and secured database server with large capacity, (III) is transparent and easy in use, and (IV) has the ability to export harmonized IPD and corresponding data dictionary to a statistical program. The DHP uses Microsoft Access as front-end application and requires a relational database management system such as Microsoft Structured Query Language (SQL) Server or MySQL as back-end application. The DHP consists of five user friendly interfaces which support the user to import original study data, to harmonize the data with a master data dictionary, and to export the harmonized data into a statistical software program of choice for further analyses. The DHP is now also adopted in two other studies. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s13104-019-4210-7) contains supplementary material, which is available to authorized users. BioMed Central 2019-03-22 /pmc/articles/PMC6431032/ /pubmed/30902064 http://dx.doi.org/10.1186/s13104-019-4210-7 Text en © The Author(s) 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research Note
Kalter, Joeri
Sweegers, Maike G.
Verdonck-de Leeuw, Irma M.
Brug, Johannes
Buffart, Laurien M.
Development and use of a flexible data harmonization platform to facilitate the harmonization of individual patient data for meta-analyses
title Development and use of a flexible data harmonization platform to facilitate the harmonization of individual patient data for meta-analyses
title_full Development and use of a flexible data harmonization platform to facilitate the harmonization of individual patient data for meta-analyses
title_fullStr Development and use of a flexible data harmonization platform to facilitate the harmonization of individual patient data for meta-analyses
title_full_unstemmed Development and use of a flexible data harmonization platform to facilitate the harmonization of individual patient data for meta-analyses
title_short Development and use of a flexible data harmonization platform to facilitate the harmonization of individual patient data for meta-analyses
title_sort development and use of a flexible data harmonization platform to facilitate the harmonization of individual patient data for meta-analyses
topic Research Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6431032/
https://www.ncbi.nlm.nih.gov/pubmed/30902064
http://dx.doi.org/10.1186/s13104-019-4210-7
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