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Development and use of a flexible data harmonization platform to facilitate the harmonization of individual patient data for meta-analyses
OBJECTIVE: Harmonizing individual patient data (IPD) for meta-analysis has clinical and statistical advantages. Harmonizing IPD from multiple studies may benefit from a flexible data harmonization platform (DHP) that allows harmonization of IPD already during data collection. This paper describes th...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6431032/ https://www.ncbi.nlm.nih.gov/pubmed/30902064 http://dx.doi.org/10.1186/s13104-019-4210-7 |
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author | Kalter, Joeri Sweegers, Maike G. Verdonck-de Leeuw, Irma M. Brug, Johannes Buffart, Laurien M. |
author_facet | Kalter, Joeri Sweegers, Maike G. Verdonck-de Leeuw, Irma M. Brug, Johannes Buffart, Laurien M. |
author_sort | Kalter, Joeri |
collection | PubMed |
description | OBJECTIVE: Harmonizing individual patient data (IPD) for meta-analysis has clinical and statistical advantages. Harmonizing IPD from multiple studies may benefit from a flexible data harmonization platform (DHP) that allows harmonization of IPD already during data collection. This paper describes the development and use of a flexible DHP that was initially developed for the Predicting OptimaL cAncer RehabIlitation and Supportive care (POLARIS) study. RESULTS: The DHP that we developed (I) allows IPD harmonization with a flexible approach, (II) has the ability to store data in a centralized and secured database server with large capacity, (III) is transparent and easy in use, and (IV) has the ability to export harmonized IPD and corresponding data dictionary to a statistical program. The DHP uses Microsoft Access as front-end application and requires a relational database management system such as Microsoft Structured Query Language (SQL) Server or MySQL as back-end application. The DHP consists of five user friendly interfaces which support the user to import original study data, to harmonize the data with a master data dictionary, and to export the harmonized data into a statistical software program of choice for further analyses. The DHP is now also adopted in two other studies. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s13104-019-4210-7) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-6431032 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-64310322019-04-04 Development and use of a flexible data harmonization platform to facilitate the harmonization of individual patient data for meta-analyses Kalter, Joeri Sweegers, Maike G. Verdonck-de Leeuw, Irma M. Brug, Johannes Buffart, Laurien M. BMC Res Notes Research Note OBJECTIVE: Harmonizing individual patient data (IPD) for meta-analysis has clinical and statistical advantages. Harmonizing IPD from multiple studies may benefit from a flexible data harmonization platform (DHP) that allows harmonization of IPD already during data collection. This paper describes the development and use of a flexible DHP that was initially developed for the Predicting OptimaL cAncer RehabIlitation and Supportive care (POLARIS) study. RESULTS: The DHP that we developed (I) allows IPD harmonization with a flexible approach, (II) has the ability to store data in a centralized and secured database server with large capacity, (III) is transparent and easy in use, and (IV) has the ability to export harmonized IPD and corresponding data dictionary to a statistical program. The DHP uses Microsoft Access as front-end application and requires a relational database management system such as Microsoft Structured Query Language (SQL) Server or MySQL as back-end application. The DHP consists of five user friendly interfaces which support the user to import original study data, to harmonize the data with a master data dictionary, and to export the harmonized data into a statistical software program of choice for further analyses. The DHP is now also adopted in two other studies. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s13104-019-4210-7) contains supplementary material, which is available to authorized users. BioMed Central 2019-03-22 /pmc/articles/PMC6431032/ /pubmed/30902064 http://dx.doi.org/10.1186/s13104-019-4210-7 Text en © The Author(s) 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Note Kalter, Joeri Sweegers, Maike G. Verdonck-de Leeuw, Irma M. Brug, Johannes Buffart, Laurien M. Development and use of a flexible data harmonization platform to facilitate the harmonization of individual patient data for meta-analyses |
title | Development and use of a flexible data harmonization platform to facilitate the harmonization of individual patient data for meta-analyses |
title_full | Development and use of a flexible data harmonization platform to facilitate the harmonization of individual patient data for meta-analyses |
title_fullStr | Development and use of a flexible data harmonization platform to facilitate the harmonization of individual patient data for meta-analyses |
title_full_unstemmed | Development and use of a flexible data harmonization platform to facilitate the harmonization of individual patient data for meta-analyses |
title_short | Development and use of a flexible data harmonization platform to facilitate the harmonization of individual patient data for meta-analyses |
title_sort | development and use of a flexible data harmonization platform to facilitate the harmonization of individual patient data for meta-analyses |
topic | Research Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6431032/ https://www.ncbi.nlm.nih.gov/pubmed/30902064 http://dx.doi.org/10.1186/s13104-019-4210-7 |
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