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Klebsiella pneumoniae ST307 with bla(OXA-181,) South Africa, 2014–2016
Klebsiella pneumoniae sequence type (ST) 307 is an emerging global antimicrobial drug–resistant clone. We used whole-genome sequencing and PCR to characterize K. pneumoniae ST307 with oxacillinase (OXA) 181 carbapenemase across several private hospitals in South Africa during 2014–2016. The South Af...
Autores principales: | , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Centers for Disease Control and Prevention
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6433043/ https://www.ncbi.nlm.nih.gov/pubmed/30882333 http://dx.doi.org/10.3201/eid2504.181482 |
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author | Lowe, Michelle Kock, Marleen M. Coetzee, Jennifer Hoosien, Ebrahim Peirano, Gisele Strydom, Kathy-Ann Ehlers, Marthie M. Mbelle, Nontombi M. Shashkina, Elena Haslam, David B. Dhawan, Puneet Donnelly, Robert J. Chen, Liang Kreiswirth, Barry N. Pitout, Johann D.D. |
author_facet | Lowe, Michelle Kock, Marleen M. Coetzee, Jennifer Hoosien, Ebrahim Peirano, Gisele Strydom, Kathy-Ann Ehlers, Marthie M. Mbelle, Nontombi M. Shashkina, Elena Haslam, David B. Dhawan, Puneet Donnelly, Robert J. Chen, Liang Kreiswirth, Barry N. Pitout, Johann D.D. |
author_sort | Lowe, Michelle |
collection | PubMed |
description | Klebsiella pneumoniae sequence type (ST) 307 is an emerging global antimicrobial drug–resistant clone. We used whole-genome sequencing and PCR to characterize K. pneumoniae ST307 with oxacillinase (OXA) 181 carbapenemase across several private hospitals in South Africa during 2014–2016. The South Africa ST307 belonged to a different clade (clade VI) with unique genomic characteristics when compared with global ST307 (clades I–V). Bayesian evolution analysis showed that clade VI emerged around March 2013 in Gauteng Province, South Africa, and then evolved during 2014 into 2 distinct lineages. K. pneumoniae ST307 clade VI with OXA-181 disseminated over a 15-month period within 42 hospitals in 23 cities across 6 northeastern provinces, affecting 350 patients. The rapid expansion of ST307 was most likely due to intrahospital, interhospital, intercity, and interprovince movements of patients. This study highlights the importance of molecular surveillance for tracking emerging antimicrobial clones. |
format | Online Article Text |
id | pubmed-6433043 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Centers for Disease Control and Prevention |
record_format | MEDLINE/PubMed |
spelling | pubmed-64330432019-04-03 Klebsiella pneumoniae ST307 with bla(OXA-181,) South Africa, 2014–2016 Lowe, Michelle Kock, Marleen M. Coetzee, Jennifer Hoosien, Ebrahim Peirano, Gisele Strydom, Kathy-Ann Ehlers, Marthie M. Mbelle, Nontombi M. Shashkina, Elena Haslam, David B. Dhawan, Puneet Donnelly, Robert J. Chen, Liang Kreiswirth, Barry N. Pitout, Johann D.D. Emerg Infect Dis Research Klebsiella pneumoniae sequence type (ST) 307 is an emerging global antimicrobial drug–resistant clone. We used whole-genome sequencing and PCR to characterize K. pneumoniae ST307 with oxacillinase (OXA) 181 carbapenemase across several private hospitals in South Africa during 2014–2016. The South Africa ST307 belonged to a different clade (clade VI) with unique genomic characteristics when compared with global ST307 (clades I–V). Bayesian evolution analysis showed that clade VI emerged around March 2013 in Gauteng Province, South Africa, and then evolved during 2014 into 2 distinct lineages. K. pneumoniae ST307 clade VI with OXA-181 disseminated over a 15-month period within 42 hospitals in 23 cities across 6 northeastern provinces, affecting 350 patients. The rapid expansion of ST307 was most likely due to intrahospital, interhospital, intercity, and interprovince movements of patients. This study highlights the importance of molecular surveillance for tracking emerging antimicrobial clones. Centers for Disease Control and Prevention 2019-04 /pmc/articles/PMC6433043/ /pubmed/30882333 http://dx.doi.org/10.3201/eid2504.181482 Text en https://creativecommons.org/licenses/by/4.0/This is a publication of the U.S. Government. This publication is in the public domain and is therefore without copyright. All text from this work may be reprinted freely. Use of these materials should be properly cited. |
spellingShingle | Research Lowe, Michelle Kock, Marleen M. Coetzee, Jennifer Hoosien, Ebrahim Peirano, Gisele Strydom, Kathy-Ann Ehlers, Marthie M. Mbelle, Nontombi M. Shashkina, Elena Haslam, David B. Dhawan, Puneet Donnelly, Robert J. Chen, Liang Kreiswirth, Barry N. Pitout, Johann D.D. Klebsiella pneumoniae ST307 with bla(OXA-181,) South Africa, 2014–2016 |
title | Klebsiella pneumoniae ST307 with bla(OXA-181,) South Africa, 2014–2016 |
title_full | Klebsiella pneumoniae ST307 with bla(OXA-181,) South Africa, 2014–2016 |
title_fullStr | Klebsiella pneumoniae ST307 with bla(OXA-181,) South Africa, 2014–2016 |
title_full_unstemmed | Klebsiella pneumoniae ST307 with bla(OXA-181,) South Africa, 2014–2016 |
title_short | Klebsiella pneumoniae ST307 with bla(OXA-181,) South Africa, 2014–2016 |
title_sort | klebsiella pneumoniae st307 with bla(oxa-181,) south africa, 2014–2016 |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6433043/ https://www.ncbi.nlm.nih.gov/pubmed/30882333 http://dx.doi.org/10.3201/eid2504.181482 |
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