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Klebsiella pneumoniae ST307 with bla(OXA-181,) South Africa, 2014–2016

Klebsiella pneumoniae sequence type (ST) 307 is an emerging global antimicrobial drug–resistant clone. We used whole-genome sequencing and PCR to characterize K. pneumoniae ST307 with oxacillinase (OXA) 181 carbapenemase across several private hospitals in South Africa during 2014–2016. The South Af...

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Autores principales: Lowe, Michelle, Kock, Marleen M., Coetzee, Jennifer, Hoosien, Ebrahim, Peirano, Gisele, Strydom, Kathy-Ann, Ehlers, Marthie M., Mbelle, Nontombi M., Shashkina, Elena, Haslam, David B., Dhawan, Puneet, Donnelly, Robert J., Chen, Liang, Kreiswirth, Barry N., Pitout, Johann D.D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Centers for Disease Control and Prevention 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6433043/
https://www.ncbi.nlm.nih.gov/pubmed/30882333
http://dx.doi.org/10.3201/eid2504.181482
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author Lowe, Michelle
Kock, Marleen M.
Coetzee, Jennifer
Hoosien, Ebrahim
Peirano, Gisele
Strydom, Kathy-Ann
Ehlers, Marthie M.
Mbelle, Nontombi M.
Shashkina, Elena
Haslam, David B.
Dhawan, Puneet
Donnelly, Robert J.
Chen, Liang
Kreiswirth, Barry N.
Pitout, Johann D.D.
author_facet Lowe, Michelle
Kock, Marleen M.
Coetzee, Jennifer
Hoosien, Ebrahim
Peirano, Gisele
Strydom, Kathy-Ann
Ehlers, Marthie M.
Mbelle, Nontombi M.
Shashkina, Elena
Haslam, David B.
Dhawan, Puneet
Donnelly, Robert J.
Chen, Liang
Kreiswirth, Barry N.
Pitout, Johann D.D.
author_sort Lowe, Michelle
collection PubMed
description Klebsiella pneumoniae sequence type (ST) 307 is an emerging global antimicrobial drug–resistant clone. We used whole-genome sequencing and PCR to characterize K. pneumoniae ST307 with oxacillinase (OXA) 181 carbapenemase across several private hospitals in South Africa during 2014–2016. The South Africa ST307 belonged to a different clade (clade VI) with unique genomic characteristics when compared with global ST307 (clades I–V). Bayesian evolution analysis showed that clade VI emerged around March 2013 in Gauteng Province, South Africa, and then evolved during 2014 into 2 distinct lineages. K. pneumoniae ST307 clade VI with OXA-181 disseminated over a 15-month period within 42 hospitals in 23 cities across 6 northeastern provinces, affecting 350 patients. The rapid expansion of ST307 was most likely due to intrahospital, interhospital, intercity, and interprovince movements of patients. This study highlights the importance of molecular surveillance for tracking emerging antimicrobial clones.
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spelling pubmed-64330432019-04-03 Klebsiella pneumoniae ST307 with bla(OXA-181,) South Africa, 2014–2016 Lowe, Michelle Kock, Marleen M. Coetzee, Jennifer Hoosien, Ebrahim Peirano, Gisele Strydom, Kathy-Ann Ehlers, Marthie M. Mbelle, Nontombi M. Shashkina, Elena Haslam, David B. Dhawan, Puneet Donnelly, Robert J. Chen, Liang Kreiswirth, Barry N. Pitout, Johann D.D. Emerg Infect Dis Research Klebsiella pneumoniae sequence type (ST) 307 is an emerging global antimicrobial drug–resistant clone. We used whole-genome sequencing and PCR to characterize K. pneumoniae ST307 with oxacillinase (OXA) 181 carbapenemase across several private hospitals in South Africa during 2014–2016. The South Africa ST307 belonged to a different clade (clade VI) with unique genomic characteristics when compared with global ST307 (clades I–V). Bayesian evolution analysis showed that clade VI emerged around March 2013 in Gauteng Province, South Africa, and then evolved during 2014 into 2 distinct lineages. K. pneumoniae ST307 clade VI with OXA-181 disseminated over a 15-month period within 42 hospitals in 23 cities across 6 northeastern provinces, affecting 350 patients. The rapid expansion of ST307 was most likely due to intrahospital, interhospital, intercity, and interprovince movements of patients. This study highlights the importance of molecular surveillance for tracking emerging antimicrobial clones. Centers for Disease Control and Prevention 2019-04 /pmc/articles/PMC6433043/ /pubmed/30882333 http://dx.doi.org/10.3201/eid2504.181482 Text en https://creativecommons.org/licenses/by/4.0/This is a publication of the U.S. Government. This publication is in the public domain and is therefore without copyright. All text from this work may be reprinted freely. Use of these materials should be properly cited.
spellingShingle Research
Lowe, Michelle
Kock, Marleen M.
Coetzee, Jennifer
Hoosien, Ebrahim
Peirano, Gisele
Strydom, Kathy-Ann
Ehlers, Marthie M.
Mbelle, Nontombi M.
Shashkina, Elena
Haslam, David B.
Dhawan, Puneet
Donnelly, Robert J.
Chen, Liang
Kreiswirth, Barry N.
Pitout, Johann D.D.
Klebsiella pneumoniae ST307 with bla(OXA-181,) South Africa, 2014–2016
title Klebsiella pneumoniae ST307 with bla(OXA-181,) South Africa, 2014–2016
title_full Klebsiella pneumoniae ST307 with bla(OXA-181,) South Africa, 2014–2016
title_fullStr Klebsiella pneumoniae ST307 with bla(OXA-181,) South Africa, 2014–2016
title_full_unstemmed Klebsiella pneumoniae ST307 with bla(OXA-181,) South Africa, 2014–2016
title_short Klebsiella pneumoniae ST307 with bla(OXA-181,) South Africa, 2014–2016
title_sort klebsiella pneumoniae st307 with bla(oxa-181,) south africa, 2014–2016
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6433043/
https://www.ncbi.nlm.nih.gov/pubmed/30882333
http://dx.doi.org/10.3201/eid2504.181482
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