Cargando…

Establishing a distributed national research infrastructure providing bioinformatics support to life science researchers in Australia

EMBL Australia Bioinformatics Resource (EMBL-ABR) is a developing national research infrastructure, providing bioinformatics resources and support to life science and biomedical researchers in Australia. EMBL-ABR comprises 10 geographically distributed national nodes with one coordinating hub, with...

Descripción completa

Detalles Bibliográficos
Autores principales: Schneider, Maria Victoria, Griffin, Philippa C, Tyagi, Sonika, Flannery, Madison, Dayalan, Saravanan, Gladman, Simon, Watson-Haigh, Nathan, Bayer, Philipp E, Charleston, Michael, Cooke, Ira, Cook, Rob, Edwards, Richard J, Edwards, David, Gorse, Dominique, McConville, Malcolm, Powell, David, Wilkins, Marc R, Lonie, Andrew
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6433737/
https://www.ncbi.nlm.nih.gov/pubmed/29106479
http://dx.doi.org/10.1093/bib/bbx071
_version_ 1783406332800401408
author Schneider, Maria Victoria
Griffin, Philippa C
Tyagi, Sonika
Flannery, Madison
Dayalan, Saravanan
Gladman, Simon
Watson-Haigh, Nathan
Bayer, Philipp E
Charleston, Michael
Cooke, Ira
Cook, Rob
Edwards, Richard J
Edwards, David
Gorse, Dominique
McConville, Malcolm
Powell, David
Wilkins, Marc R
Lonie, Andrew
author_facet Schneider, Maria Victoria
Griffin, Philippa C
Tyagi, Sonika
Flannery, Madison
Dayalan, Saravanan
Gladman, Simon
Watson-Haigh, Nathan
Bayer, Philipp E
Charleston, Michael
Cooke, Ira
Cook, Rob
Edwards, Richard J
Edwards, David
Gorse, Dominique
McConville, Malcolm
Powell, David
Wilkins, Marc R
Lonie, Andrew
author_sort Schneider, Maria Victoria
collection PubMed
description EMBL Australia Bioinformatics Resource (EMBL-ABR) is a developing national research infrastructure, providing bioinformatics resources and support to life science and biomedical researchers in Australia. EMBL-ABR comprises 10 geographically distributed national nodes with one coordinating hub, with current funding provided through Bioplatforms Australia and the University of Melbourne for its initial 2-year development phase. The EMBL-ABR mission is to: (1) increase Australia’s capacity in bioinformatics and data sciences; (2) contribute to the development of training in bioinformatics skills; (3) showcase Australian data sets at an international level and (4) enable engagement in international programs. The activities of EMBL-ABR are focussed in six key areas, aligning with comparable international initiatives such as ELIXIR, CyVerse and NIH Commons. These key areas—Tools, Data, Standards, Platforms, Compute and Training—are described in this article.
format Online
Article
Text
id pubmed-6433737
institution National Center for Biotechnology Information
language English
publishDate 2017
publisher Oxford University Press
record_format MEDLINE/PubMed
spelling pubmed-64337372019-04-01 Establishing a distributed national research infrastructure providing bioinformatics support to life science researchers in Australia Schneider, Maria Victoria Griffin, Philippa C Tyagi, Sonika Flannery, Madison Dayalan, Saravanan Gladman, Simon Watson-Haigh, Nathan Bayer, Philipp E Charleston, Michael Cooke, Ira Cook, Rob Edwards, Richard J Edwards, David Gorse, Dominique McConville, Malcolm Powell, David Wilkins, Marc R Lonie, Andrew Brief Bioinform Paper EMBL Australia Bioinformatics Resource (EMBL-ABR) is a developing national research infrastructure, providing bioinformatics resources and support to life science and biomedical researchers in Australia. EMBL-ABR comprises 10 geographically distributed national nodes with one coordinating hub, with current funding provided through Bioplatforms Australia and the University of Melbourne for its initial 2-year development phase. The EMBL-ABR mission is to: (1) increase Australia’s capacity in bioinformatics and data sciences; (2) contribute to the development of training in bioinformatics skills; (3) showcase Australian data sets at an international level and (4) enable engagement in international programs. The activities of EMBL-ABR are focussed in six key areas, aligning with comparable international initiatives such as ELIXIR, CyVerse and NIH Commons. These key areas—Tools, Data, Standards, Platforms, Compute and Training—are described in this article. Oxford University Press 2017-06-30 /pmc/articles/PMC6433737/ /pubmed/29106479 http://dx.doi.org/10.1093/bib/bbx071 Text en © The Author 2017. Published by Oxford University Press. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Paper
Schneider, Maria Victoria
Griffin, Philippa C
Tyagi, Sonika
Flannery, Madison
Dayalan, Saravanan
Gladman, Simon
Watson-Haigh, Nathan
Bayer, Philipp E
Charleston, Michael
Cooke, Ira
Cook, Rob
Edwards, Richard J
Edwards, David
Gorse, Dominique
McConville, Malcolm
Powell, David
Wilkins, Marc R
Lonie, Andrew
Establishing a distributed national research infrastructure providing bioinformatics support to life science researchers in Australia
title Establishing a distributed national research infrastructure providing bioinformatics support to life science researchers in Australia
title_full Establishing a distributed national research infrastructure providing bioinformatics support to life science researchers in Australia
title_fullStr Establishing a distributed national research infrastructure providing bioinformatics support to life science researchers in Australia
title_full_unstemmed Establishing a distributed national research infrastructure providing bioinformatics support to life science researchers in Australia
title_short Establishing a distributed national research infrastructure providing bioinformatics support to life science researchers in Australia
title_sort establishing a distributed national research infrastructure providing bioinformatics support to life science researchers in australia
topic Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6433737/
https://www.ncbi.nlm.nih.gov/pubmed/29106479
http://dx.doi.org/10.1093/bib/bbx071
work_keys_str_mv AT schneidermariavictoria establishingadistributednationalresearchinfrastructureprovidingbioinformaticssupporttolifescienceresearchersinaustralia
AT griffinphilippac establishingadistributednationalresearchinfrastructureprovidingbioinformaticssupporttolifescienceresearchersinaustralia
AT tyagisonika establishingadistributednationalresearchinfrastructureprovidingbioinformaticssupporttolifescienceresearchersinaustralia
AT flannerymadison establishingadistributednationalresearchinfrastructureprovidingbioinformaticssupporttolifescienceresearchersinaustralia
AT dayalansaravanan establishingadistributednationalresearchinfrastructureprovidingbioinformaticssupporttolifescienceresearchersinaustralia
AT gladmansimon establishingadistributednationalresearchinfrastructureprovidingbioinformaticssupporttolifescienceresearchersinaustralia
AT watsonhaighnathan establishingadistributednationalresearchinfrastructureprovidingbioinformaticssupporttolifescienceresearchersinaustralia
AT bayerphilippe establishingadistributednationalresearchinfrastructureprovidingbioinformaticssupporttolifescienceresearchersinaustralia
AT charlestonmichael establishingadistributednationalresearchinfrastructureprovidingbioinformaticssupporttolifescienceresearchersinaustralia
AT cookeira establishingadistributednationalresearchinfrastructureprovidingbioinformaticssupporttolifescienceresearchersinaustralia
AT cookrob establishingadistributednationalresearchinfrastructureprovidingbioinformaticssupporttolifescienceresearchersinaustralia
AT edwardsrichardj establishingadistributednationalresearchinfrastructureprovidingbioinformaticssupporttolifescienceresearchersinaustralia
AT edwardsdavid establishingadistributednationalresearchinfrastructureprovidingbioinformaticssupporttolifescienceresearchersinaustralia
AT gorsedominique establishingadistributednationalresearchinfrastructureprovidingbioinformaticssupporttolifescienceresearchersinaustralia
AT mcconvillemalcolm establishingadistributednationalresearchinfrastructureprovidingbioinformaticssupporttolifescienceresearchersinaustralia
AT powelldavid establishingadistributednationalresearchinfrastructureprovidingbioinformaticssupporttolifescienceresearchersinaustralia
AT wilkinsmarcr establishingadistributednationalresearchinfrastructureprovidingbioinformaticssupporttolifescienceresearchersinaustralia
AT lonieandrew establishingadistributednationalresearchinfrastructureprovidingbioinformaticssupporttolifescienceresearchersinaustralia