Cargando…

Population genomics of rapidly invading lionfish in the Caribbean reveals signals of range expansion in the absence of spatial population structure

Range expansions driven by global change and species invasions may have significant genomic, evolutionary, and ecological implications. During range expansions, strong genetic drift characterized by repeated founder events can result in decreased genetic diversity with increased distance from the ce...

Descripción completa

Detalles Bibliográficos
Autores principales: Bors, Eleanor K., Herrera, Santiago, Morris, James A., Shank, Timothy M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6434604/
https://www.ncbi.nlm.nih.gov/pubmed/30962894
http://dx.doi.org/10.1002/ece3.4952
_version_ 1783406505074098176
author Bors, Eleanor K.
Herrera, Santiago
Morris, James A.
Shank, Timothy M.
author_facet Bors, Eleanor K.
Herrera, Santiago
Morris, James A.
Shank, Timothy M.
author_sort Bors, Eleanor K.
collection PubMed
description Range expansions driven by global change and species invasions may have significant genomic, evolutionary, and ecological implications. During range expansions, strong genetic drift characterized by repeated founder events can result in decreased genetic diversity with increased distance from the center of the historic range, or the point of invasion. The invasion of the Indo‐Pacific lionfish, Pterois volitans, into waters off the US East Coast, Gulf of Mexico, and Caribbean Sea provides a natural system to study rapid range expansion in an invasive marine fish with high dispersal capabilities. We report results from 12,759 single nucleotide polymorphism loci sequenced by restriction enzyme‐associated DNA sequencing for nine P. volitans sampling areas in the invaded range, including Florida and other sites throughout the Caribbean, as well as mitochondrial control region D‐loop data. Analyses revealed low to no spatially explicit metapopulation genetic structure, which is partly consistent with previous finding of little structure within ocean basins, but partly divergent from initial reports of between‐basin structure. Genetic diversity, however, was not homogeneous across all sampled sites. Patterns of genetic diversity correlate with invasion pathway. Observed heterozygosity, averaged across all loci within a population, decreases with distance from Florida while expected heterozygosity is mostly constant in sampled populations, indicating population genetic disequilibrium correlated with distance from the point of invasion. Using an F (ST) outlier analysis and a Bayesian environmental correlation analysis, we identified 256 and 616 loci, respectively, that could be experiencing selection or genetic drift. Of these, 24 loci were shared between the two methods.
format Online
Article
Text
id pubmed-6434604
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher John Wiley and Sons Inc.
record_format MEDLINE/PubMed
spelling pubmed-64346042019-04-08 Population genomics of rapidly invading lionfish in the Caribbean reveals signals of range expansion in the absence of spatial population structure Bors, Eleanor K. Herrera, Santiago Morris, James A. Shank, Timothy M. Ecol Evol Original Research Range expansions driven by global change and species invasions may have significant genomic, evolutionary, and ecological implications. During range expansions, strong genetic drift characterized by repeated founder events can result in decreased genetic diversity with increased distance from the center of the historic range, or the point of invasion. The invasion of the Indo‐Pacific lionfish, Pterois volitans, into waters off the US East Coast, Gulf of Mexico, and Caribbean Sea provides a natural system to study rapid range expansion in an invasive marine fish with high dispersal capabilities. We report results from 12,759 single nucleotide polymorphism loci sequenced by restriction enzyme‐associated DNA sequencing for nine P. volitans sampling areas in the invaded range, including Florida and other sites throughout the Caribbean, as well as mitochondrial control region D‐loop data. Analyses revealed low to no spatially explicit metapopulation genetic structure, which is partly consistent with previous finding of little structure within ocean basins, but partly divergent from initial reports of between‐basin structure. Genetic diversity, however, was not homogeneous across all sampled sites. Patterns of genetic diversity correlate with invasion pathway. Observed heterozygosity, averaged across all loci within a population, decreases with distance from Florida while expected heterozygosity is mostly constant in sampled populations, indicating population genetic disequilibrium correlated with distance from the point of invasion. Using an F (ST) outlier analysis and a Bayesian environmental correlation analysis, we identified 256 and 616 loci, respectively, that could be experiencing selection or genetic drift. Of these, 24 loci were shared between the two methods. John Wiley and Sons Inc. 2019-02-10 /pmc/articles/PMC6434604/ /pubmed/30962894 http://dx.doi.org/10.1002/ece3.4952 Text en © 2019 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Research
Bors, Eleanor K.
Herrera, Santiago
Morris, James A.
Shank, Timothy M.
Population genomics of rapidly invading lionfish in the Caribbean reveals signals of range expansion in the absence of spatial population structure
title Population genomics of rapidly invading lionfish in the Caribbean reveals signals of range expansion in the absence of spatial population structure
title_full Population genomics of rapidly invading lionfish in the Caribbean reveals signals of range expansion in the absence of spatial population structure
title_fullStr Population genomics of rapidly invading lionfish in the Caribbean reveals signals of range expansion in the absence of spatial population structure
title_full_unstemmed Population genomics of rapidly invading lionfish in the Caribbean reveals signals of range expansion in the absence of spatial population structure
title_short Population genomics of rapidly invading lionfish in the Caribbean reveals signals of range expansion in the absence of spatial population structure
title_sort population genomics of rapidly invading lionfish in the caribbean reveals signals of range expansion in the absence of spatial population structure
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6434604/
https://www.ncbi.nlm.nih.gov/pubmed/30962894
http://dx.doi.org/10.1002/ece3.4952
work_keys_str_mv AT borseleanork populationgenomicsofrapidlyinvadinglionfishinthecaribbeanrevealssignalsofrangeexpansionintheabsenceofspatialpopulationstructure
AT herrerasantiago populationgenomicsofrapidlyinvadinglionfishinthecaribbeanrevealssignalsofrangeexpansionintheabsenceofspatialpopulationstructure
AT morrisjamesa populationgenomicsofrapidlyinvadinglionfishinthecaribbeanrevealssignalsofrangeexpansionintheabsenceofspatialpopulationstructure
AT shanktimothym populationgenomicsofrapidlyinvadinglionfishinthecaribbeanrevealssignalsofrangeexpansionintheabsenceofspatialpopulationstructure