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A quantitative method for the high throughput screening for the soil adhesion properties of plant and microbial polysaccharides and exudates
BACKGROUND AND AIMS: Understanding the structures and functions of carbon-based molecules in soils is an important goal in the context of soils as an ecosystem function of immense importance. Polysaccharides are implicated in maintaining soil aggregate status but have not been extensively dissected...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer International Publishing
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6435204/ https://www.ncbi.nlm.nih.gov/pubmed/30996485 http://dx.doi.org/10.1007/s11104-018-3670-1 |
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author | Akhtar, Jumana Galloway, Andrew F. Nikolopoulos, Georgios Field, Katie J. Knox, Paul |
author_facet | Akhtar, Jumana Galloway, Andrew F. Nikolopoulos, Georgios Field, Katie J. Knox, Paul |
author_sort | Akhtar, Jumana |
collection | PubMed |
description | BACKGROUND AND AIMS: Understanding the structures and functions of carbon-based molecules in soils is an important goal in the context of soils as an ecosystem function of immense importance. Polysaccharides are implicated in maintaining soil aggregate status but have not been extensively dissected in terms of their structures and soil adhesion properties. This is largely because of the technical difficulties in identifying polysaccharide structures and quantifying any functional properties. METHODS: Here, we describe the use of a novel nitrocellulose-based adhesion assay to determine the relative capacities for soil adhesion of over twenty plant and microbial polysaccharides that are likely to be present in soil and to contribute to organic matter content and properties. Weights of soil adhered to spots of known amounts of specific polysaccharides were quantified by scanning of the nitrocellulose sheets. RESULTS: The most effective polysaccharides identified from this survey included chitosan, β-1,3-glucan, gum tragacanth, xanthan and xyloglucan. We also demonstrate that the soil adhesion assay is suitable to assess the soil-binding properties of plant exudates. CONCLUSIONS: The soil adhesion assay will be useful for the functional dissection of the organic matter components of soils and also of the factors involved in soil attachment to plant roots and in rhizosheath formation. |
format | Online Article Text |
id | pubmed-6435204 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Springer International Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-64352042019-04-15 A quantitative method for the high throughput screening for the soil adhesion properties of plant and microbial polysaccharides and exudates Akhtar, Jumana Galloway, Andrew F. Nikolopoulos, Georgios Field, Katie J. Knox, Paul Plant Soil Methods Paper BACKGROUND AND AIMS: Understanding the structures and functions of carbon-based molecules in soils is an important goal in the context of soils as an ecosystem function of immense importance. Polysaccharides are implicated in maintaining soil aggregate status but have not been extensively dissected in terms of their structures and soil adhesion properties. This is largely because of the technical difficulties in identifying polysaccharide structures and quantifying any functional properties. METHODS: Here, we describe the use of a novel nitrocellulose-based adhesion assay to determine the relative capacities for soil adhesion of over twenty plant and microbial polysaccharides that are likely to be present in soil and to contribute to organic matter content and properties. Weights of soil adhered to spots of known amounts of specific polysaccharides were quantified by scanning of the nitrocellulose sheets. RESULTS: The most effective polysaccharides identified from this survey included chitosan, β-1,3-glucan, gum tragacanth, xanthan and xyloglucan. We also demonstrate that the soil adhesion assay is suitable to assess the soil-binding properties of plant exudates. CONCLUSIONS: The soil adhesion assay will be useful for the functional dissection of the organic matter components of soils and also of the factors involved in soil attachment to plant roots and in rhizosheath formation. Springer International Publishing 2018-05-04 2018 /pmc/articles/PMC6435204/ /pubmed/30996485 http://dx.doi.org/10.1007/s11104-018-3670-1 Text en © The Author(s) 2018 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. |
spellingShingle | Methods Paper Akhtar, Jumana Galloway, Andrew F. Nikolopoulos, Georgios Field, Katie J. Knox, Paul A quantitative method for the high throughput screening for the soil adhesion properties of plant and microbial polysaccharides and exudates |
title | A quantitative method for the high throughput screening for the soil adhesion properties of plant and microbial polysaccharides and exudates |
title_full | A quantitative method for the high throughput screening for the soil adhesion properties of plant and microbial polysaccharides and exudates |
title_fullStr | A quantitative method for the high throughput screening for the soil adhesion properties of plant and microbial polysaccharides and exudates |
title_full_unstemmed | A quantitative method for the high throughput screening for the soil adhesion properties of plant and microbial polysaccharides and exudates |
title_short | A quantitative method for the high throughput screening for the soil adhesion properties of plant and microbial polysaccharides and exudates |
title_sort | quantitative method for the high throughput screening for the soil adhesion properties of plant and microbial polysaccharides and exudates |
topic | Methods Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6435204/ https://www.ncbi.nlm.nih.gov/pubmed/30996485 http://dx.doi.org/10.1007/s11104-018-3670-1 |
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