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Exponential equilibration of genetic circuits using entropy methods

We analyse a continuum model for genetic circuits based on a partial integro-differential equation initially proposed in Friedman et al. (Phys Rev Lett 97(16):168302, 2006) as an approximation of a chemical master equation. We use entropy methods to show exponentially fast convergence to equilibrium...

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Detalles Bibliográficos
Autores principales: Cañizo, José A., Carrillo, José A., Pájaro, Manuel
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Berlin Heidelberg 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6437139/
https://www.ncbi.nlm.nih.gov/pubmed/30120513
http://dx.doi.org/10.1007/s00285-018-1277-z
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author Cañizo, José A.
Carrillo, José A.
Pájaro, Manuel
author_facet Cañizo, José A.
Carrillo, José A.
Pájaro, Manuel
author_sort Cañizo, José A.
collection PubMed
description We analyse a continuum model for genetic circuits based on a partial integro-differential equation initially proposed in Friedman et al. (Phys Rev Lett 97(16):168302, 2006) as an approximation of a chemical master equation. We use entropy methods to show exponentially fast convergence to equilibrium for this model with explicit bounds. The asymptotic equilibration for the multidimensional case of more than one gene is also obtained under suitable assumptions on the equilibrium stationary states. The asymptotic equilibration property for networks involving one and more than one gene is investigated via numerical simulations.
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spelling pubmed-64371392019-04-15 Exponential equilibration of genetic circuits using entropy methods Cañizo, José A. Carrillo, José A. Pájaro, Manuel J Math Biol Article We analyse a continuum model for genetic circuits based on a partial integro-differential equation initially proposed in Friedman et al. (Phys Rev Lett 97(16):168302, 2006) as an approximation of a chemical master equation. We use entropy methods to show exponentially fast convergence to equilibrium for this model with explicit bounds. The asymptotic equilibration for the multidimensional case of more than one gene is also obtained under suitable assumptions on the equilibrium stationary states. The asymptotic equilibration property for networks involving one and more than one gene is investigated via numerical simulations. Springer Berlin Heidelberg 2018-08-17 2019 /pmc/articles/PMC6437139/ /pubmed/30120513 http://dx.doi.org/10.1007/s00285-018-1277-z Text en © The Author(s) 2018 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.
spellingShingle Article
Cañizo, José A.
Carrillo, José A.
Pájaro, Manuel
Exponential equilibration of genetic circuits using entropy methods
title Exponential equilibration of genetic circuits using entropy methods
title_full Exponential equilibration of genetic circuits using entropy methods
title_fullStr Exponential equilibration of genetic circuits using entropy methods
title_full_unstemmed Exponential equilibration of genetic circuits using entropy methods
title_short Exponential equilibration of genetic circuits using entropy methods
title_sort exponential equilibration of genetic circuits using entropy methods
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6437139/
https://www.ncbi.nlm.nih.gov/pubmed/30120513
http://dx.doi.org/10.1007/s00285-018-1277-z
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