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Exponential equilibration of genetic circuits using entropy methods
We analyse a continuum model for genetic circuits based on a partial integro-differential equation initially proposed in Friedman et al. (Phys Rev Lett 97(16):168302, 2006) as an approximation of a chemical master equation. We use entropy methods to show exponentially fast convergence to equilibrium...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Berlin Heidelberg
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6437139/ https://www.ncbi.nlm.nih.gov/pubmed/30120513 http://dx.doi.org/10.1007/s00285-018-1277-z |
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author | Cañizo, José A. Carrillo, José A. Pájaro, Manuel |
author_facet | Cañizo, José A. Carrillo, José A. Pájaro, Manuel |
author_sort | Cañizo, José A. |
collection | PubMed |
description | We analyse a continuum model for genetic circuits based on a partial integro-differential equation initially proposed in Friedman et al. (Phys Rev Lett 97(16):168302, 2006) as an approximation of a chemical master equation. We use entropy methods to show exponentially fast convergence to equilibrium for this model with explicit bounds. The asymptotic equilibration for the multidimensional case of more than one gene is also obtained under suitable assumptions on the equilibrium stationary states. The asymptotic equilibration property for networks involving one and more than one gene is investigated via numerical simulations. |
format | Online Article Text |
id | pubmed-6437139 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-64371392019-04-15 Exponential equilibration of genetic circuits using entropy methods Cañizo, José A. Carrillo, José A. Pájaro, Manuel J Math Biol Article We analyse a continuum model for genetic circuits based on a partial integro-differential equation initially proposed in Friedman et al. (Phys Rev Lett 97(16):168302, 2006) as an approximation of a chemical master equation. We use entropy methods to show exponentially fast convergence to equilibrium for this model with explicit bounds. The asymptotic equilibration for the multidimensional case of more than one gene is also obtained under suitable assumptions on the equilibrium stationary states. The asymptotic equilibration property for networks involving one and more than one gene is investigated via numerical simulations. Springer Berlin Heidelberg 2018-08-17 2019 /pmc/articles/PMC6437139/ /pubmed/30120513 http://dx.doi.org/10.1007/s00285-018-1277-z Text en © The Author(s) 2018 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. |
spellingShingle | Article Cañizo, José A. Carrillo, José A. Pájaro, Manuel Exponential equilibration of genetic circuits using entropy methods |
title | Exponential equilibration of genetic circuits using entropy methods |
title_full | Exponential equilibration of genetic circuits using entropy methods |
title_fullStr | Exponential equilibration of genetic circuits using entropy methods |
title_full_unstemmed | Exponential equilibration of genetic circuits using entropy methods |
title_short | Exponential equilibration of genetic circuits using entropy methods |
title_sort | exponential equilibration of genetic circuits using entropy methods |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6437139/ https://www.ncbi.nlm.nih.gov/pubmed/30120513 http://dx.doi.org/10.1007/s00285-018-1277-z |
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