Cargando…
Introduction to Digital Image Analysis in Whole-slide Imaging: A White Paper from the Digital Pathology Association
The advent of whole-slide imaging in digital pathology has brought about the advancement of computer-aided examination of tissue via digital image analysis. Digitized slides can now be easily annotated and analyzed via a variety of algorithms. This study reviews the fundamentals of tissue image anal...
Autores principales: | , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Wolters Kluwer - Medknow
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6437786/ https://www.ncbi.nlm.nih.gov/pubmed/30984469 http://dx.doi.org/10.4103/jpi.jpi_82_18 |
_version_ | 1783406988853510144 |
---|---|
author | Aeffner, Famke Zarella, Mark D. Buchbinder, Nathan Bui, Marilyn M. Goodman, Matthew R. Hartman, Douglas J. Lujan, Giovanni M. Molani, Mariam A. Parwani, Anil V. Lillard, Kate Turner, Oliver C. Vemuri, Venkata N. P. Yuil-Valdes, Ana G. Bowman, Douglas |
author_facet | Aeffner, Famke Zarella, Mark D. Buchbinder, Nathan Bui, Marilyn M. Goodman, Matthew R. Hartman, Douglas J. Lujan, Giovanni M. Molani, Mariam A. Parwani, Anil V. Lillard, Kate Turner, Oliver C. Vemuri, Venkata N. P. Yuil-Valdes, Ana G. Bowman, Douglas |
author_sort | Aeffner, Famke |
collection | PubMed |
description | The advent of whole-slide imaging in digital pathology has brought about the advancement of computer-aided examination of tissue via digital image analysis. Digitized slides can now be easily annotated and analyzed via a variety of algorithms. This study reviews the fundamentals of tissue image analysis and aims to provide pathologists with basic information regarding the features, applications, and general workflow of these new tools. The review gives an overview of the basic categories of software solutions available, potential analysis strategies, technical considerations, and general algorithm readouts. Advantages and limitations of tissue image analysis are discussed, and emerging concepts, such as artificial intelligence and machine learning, are introduced. Finally, examples of how digital image analysis tools are currently being used in diagnostic laboratories, translational research, and drug development are discussed. |
format | Online Article Text |
id | pubmed-6437786 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Wolters Kluwer - Medknow |
record_format | MEDLINE/PubMed |
spelling | pubmed-64377862019-04-12 Introduction to Digital Image Analysis in Whole-slide Imaging: A White Paper from the Digital Pathology Association Aeffner, Famke Zarella, Mark D. Buchbinder, Nathan Bui, Marilyn M. Goodman, Matthew R. Hartman, Douglas J. Lujan, Giovanni M. Molani, Mariam A. Parwani, Anil V. Lillard, Kate Turner, Oliver C. Vemuri, Venkata N. P. Yuil-Valdes, Ana G. Bowman, Douglas J Pathol Inform Review Article The advent of whole-slide imaging in digital pathology has brought about the advancement of computer-aided examination of tissue via digital image analysis. Digitized slides can now be easily annotated and analyzed via a variety of algorithms. This study reviews the fundamentals of tissue image analysis and aims to provide pathologists with basic information regarding the features, applications, and general workflow of these new tools. The review gives an overview of the basic categories of software solutions available, potential analysis strategies, technical considerations, and general algorithm readouts. Advantages and limitations of tissue image analysis are discussed, and emerging concepts, such as artificial intelligence and machine learning, are introduced. Finally, examples of how digital image analysis tools are currently being used in diagnostic laboratories, translational research, and drug development are discussed. Wolters Kluwer - Medknow 2019-03-08 /pmc/articles/PMC6437786/ /pubmed/30984469 http://dx.doi.org/10.4103/jpi.jpi_82_18 Text en Copyright: © 2019 Journal of Pathology Informatics http://creativecommons.org/licenses/by-nc-sa/4.0 This is an open access journal, and articles are distributed under the terms of the Creative Commons Attribution-NonCommercial-ShareAlike 4.0 License, which allows others to remix, tweak, and build upon the work non-commercially, as long as appropriate credit is given and the new creations are licensed under the identical terms. |
spellingShingle | Review Article Aeffner, Famke Zarella, Mark D. Buchbinder, Nathan Bui, Marilyn M. Goodman, Matthew R. Hartman, Douglas J. Lujan, Giovanni M. Molani, Mariam A. Parwani, Anil V. Lillard, Kate Turner, Oliver C. Vemuri, Venkata N. P. Yuil-Valdes, Ana G. Bowman, Douglas Introduction to Digital Image Analysis in Whole-slide Imaging: A White Paper from the Digital Pathology Association |
title | Introduction to Digital Image Analysis in Whole-slide Imaging: A White Paper from the Digital Pathology Association |
title_full | Introduction to Digital Image Analysis in Whole-slide Imaging: A White Paper from the Digital Pathology Association |
title_fullStr | Introduction to Digital Image Analysis in Whole-slide Imaging: A White Paper from the Digital Pathology Association |
title_full_unstemmed | Introduction to Digital Image Analysis in Whole-slide Imaging: A White Paper from the Digital Pathology Association |
title_short | Introduction to Digital Image Analysis in Whole-slide Imaging: A White Paper from the Digital Pathology Association |
title_sort | introduction to digital image analysis in whole-slide imaging: a white paper from the digital pathology association |
topic | Review Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6437786/ https://www.ncbi.nlm.nih.gov/pubmed/30984469 http://dx.doi.org/10.4103/jpi.jpi_82_18 |
work_keys_str_mv | AT aeffnerfamke introductiontodigitalimageanalysisinwholeslideimagingawhitepaperfromthedigitalpathologyassociation AT zarellamarkd introductiontodigitalimageanalysisinwholeslideimagingawhitepaperfromthedigitalpathologyassociation AT buchbindernathan introductiontodigitalimageanalysisinwholeslideimagingawhitepaperfromthedigitalpathologyassociation AT buimarilynm introductiontodigitalimageanalysisinwholeslideimagingawhitepaperfromthedigitalpathologyassociation AT goodmanmatthewr introductiontodigitalimageanalysisinwholeslideimagingawhitepaperfromthedigitalpathologyassociation AT hartmandouglasj introductiontodigitalimageanalysisinwholeslideimagingawhitepaperfromthedigitalpathologyassociation AT lujangiovannim introductiontodigitalimageanalysisinwholeslideimagingawhitepaperfromthedigitalpathologyassociation AT molanimariama introductiontodigitalimageanalysisinwholeslideimagingawhitepaperfromthedigitalpathologyassociation AT parwanianilv introductiontodigitalimageanalysisinwholeslideimagingawhitepaperfromthedigitalpathologyassociation AT lillardkate introductiontodigitalimageanalysisinwholeslideimagingawhitepaperfromthedigitalpathologyassociation AT turneroliverc introductiontodigitalimageanalysisinwholeslideimagingawhitepaperfromthedigitalpathologyassociation AT vemurivenkatanp introductiontodigitalimageanalysisinwholeslideimagingawhitepaperfromthedigitalpathologyassociation AT yuilvaldesanag introductiontodigitalimageanalysisinwholeslideimagingawhitepaperfromthedigitalpathologyassociation AT bowmandouglas introductiontodigitalimageanalysisinwholeslideimagingawhitepaperfromthedigitalpathologyassociation |