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(1)H, (13)C, (15)N resonance assignment of the C-terminal domain of the bifunctional enzyme TraI of plasmid R1
Transfer of genetic material is the main mechanism underlying the spread of antibiotic resistance and virulence factors within the bacterial community. Conjugation is one such process by which the genetic material is shared from one bacterium to another. The DNA substrate is processed and prepared f...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Springer Netherlands
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6439144/ https://www.ncbi.nlm.nih.gov/pubmed/30617945 http://dx.doi.org/10.1007/s12104-018-9863-y |
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author | Krishna, Bhattiprolu Gubensäk, Nina Wagner, Gabriel E. Zechner, Ellen Raffl, Sandra Becker, Walter Schrank, Evelyne Zangger, Klaus |
author_facet | Krishna, Bhattiprolu Gubensäk, Nina Wagner, Gabriel E. Zechner, Ellen Raffl, Sandra Becker, Walter Schrank, Evelyne Zangger, Klaus |
author_sort | Krishna, Bhattiprolu |
collection | PubMed |
description | Transfer of genetic material is the main mechanism underlying the spread of antibiotic resistance and virulence factors within the bacterial community. Conjugation is one such process by which the genetic material is shared from one bacterium to another. The DNA substrate is processed and prepared for transfer by a multi-protein complex called the relaxosome .The relaxosome of plasmid R1 possesses the most crucial enzyme TraI which, both nicks and unwinds the dsDNA substrate. TraI comprises 1765 residues and multiple functional domains, including those catalyzing the DNA trans-esterase (relaxase) on the dsDNA designated for a conjugative transfer and DNA helicase activities. Structural and functional studies have been reported for most of the TraI except the C-terminal domain spanning from residue 1630 to 1765. This region is the least understood part of TraI and is thought to be highly disordered and flexible. This region, being intrinsically disordered, is hypothesized to be serving as an interacting platform for other proteins involved in this DNA transfer initiation mechanism. In this work, we report the (1)H, (13)C, (15)N resonance assignment of this region as well as the secondary structure information based on the backbone chemical shifts. |
format | Online Article Text |
id | pubmed-6439144 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Springer Netherlands |
record_format | MEDLINE/PubMed |
spelling | pubmed-64391442019-04-15 (1)H, (13)C, (15)N resonance assignment of the C-terminal domain of the bifunctional enzyme TraI of plasmid R1 Krishna, Bhattiprolu Gubensäk, Nina Wagner, Gabriel E. Zechner, Ellen Raffl, Sandra Becker, Walter Schrank, Evelyne Zangger, Klaus Biomol NMR Assign Article Transfer of genetic material is the main mechanism underlying the spread of antibiotic resistance and virulence factors within the bacterial community. Conjugation is one such process by which the genetic material is shared from one bacterium to another. The DNA substrate is processed and prepared for transfer by a multi-protein complex called the relaxosome .The relaxosome of plasmid R1 possesses the most crucial enzyme TraI which, both nicks and unwinds the dsDNA substrate. TraI comprises 1765 residues and multiple functional domains, including those catalyzing the DNA trans-esterase (relaxase) on the dsDNA designated for a conjugative transfer and DNA helicase activities. Structural and functional studies have been reported for most of the TraI except the C-terminal domain spanning from residue 1630 to 1765. This region is the least understood part of TraI and is thought to be highly disordered and flexible. This region, being intrinsically disordered, is hypothesized to be serving as an interacting platform for other proteins involved in this DNA transfer initiation mechanism. In this work, we report the (1)H, (13)C, (15)N resonance assignment of this region as well as the secondary structure information based on the backbone chemical shifts. Springer Netherlands 2019-01-07 2019 /pmc/articles/PMC6439144/ /pubmed/30617945 http://dx.doi.org/10.1007/s12104-018-9863-y Text en © The Author(s) 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. |
spellingShingle | Article Krishna, Bhattiprolu Gubensäk, Nina Wagner, Gabriel E. Zechner, Ellen Raffl, Sandra Becker, Walter Schrank, Evelyne Zangger, Klaus (1)H, (13)C, (15)N resonance assignment of the C-terminal domain of the bifunctional enzyme TraI of plasmid R1 |
title | (1)H, (13)C, (15)N resonance assignment of the C-terminal domain of the bifunctional enzyme TraI of plasmid R1 |
title_full | (1)H, (13)C, (15)N resonance assignment of the C-terminal domain of the bifunctional enzyme TraI of plasmid R1 |
title_fullStr | (1)H, (13)C, (15)N resonance assignment of the C-terminal domain of the bifunctional enzyme TraI of plasmid R1 |
title_full_unstemmed | (1)H, (13)C, (15)N resonance assignment of the C-terminal domain of the bifunctional enzyme TraI of plasmid R1 |
title_short | (1)H, (13)C, (15)N resonance assignment of the C-terminal domain of the bifunctional enzyme TraI of plasmid R1 |
title_sort | (1)h, (13)c, (15)n resonance assignment of the c-terminal domain of the bifunctional enzyme trai of plasmid r1 |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6439144/ https://www.ncbi.nlm.nih.gov/pubmed/30617945 http://dx.doi.org/10.1007/s12104-018-9863-y |
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