Cargando…
Evaluation of 16S rRNA Databases for Taxonomic Assignments Using a Mock Community
Taxonomic identification is fundamental to all microbiology studies. Particularly in metagenomics, which identifies the composition of microorganisms using thousands of sequences, its importance is even greater. Identification is inevitably affected by the choice of database. This study was conducte...
Autores principales: | Park, Sang-Cheol, Won, Sungho |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Korea Genome Organization
2018
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6440677/ https://www.ncbi.nlm.nih.gov/pubmed/30602085 http://dx.doi.org/10.5808/GI.2018.16.4.e24 |
Ejemplares similares
-
Improved taxonomic assignment of human intestinal 16S rRNA sequences by a dedicated reference database
por: Ritari, Jarmo, et al.
Publicado: (2015) -
Improved taxonomic assignment of rumen bacterial 16S rRNA sequences using a revised SILVA taxonomic framework
por: Henderson, Gemma, et al.
Publicado: (2019) -
Evaluating Established Methods for Rumen 16S rRNA Amplicon Sequencing With Mock Microbial Populations
por: McGovern, Emily, et al.
Publicado: (2018) -
Evaluation of the Performances of Ribosomal Database Project (RDP) Classifier for Taxonomic Assignment of 16S rRNA Metabarcoding Sequences Generated from Illumina-Solexa NGS
por: Bacci, Giovanni, et al.
Publicado: (2015) -
Benchmarking taxonomic assignments based on 16S rRNA gene profiling of the microbiota from commonly sampled environments
por: Almeida, Alexandre, et al.
Publicado: (2018)