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Differences in Soil Bacterial Community Compositions in Paddy Fields under Organic and Conventional Farming Conditions
Soil bacterial community compositions and temporal changes in organic paddy fields were elucidated using a 16S rRNA gene amplicon sequencing analysis with a high-throughput next generation sequencer. At transplanting, bacterial community compositions in organic and conventional paddy fields were mos...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
the Japanese Society of Microbial Ecology (JSME)/the Japanese Society of Soil Microbiology (JSSM)/the Taiwan Society of Microbial Ecology (TSME)/the Japanese Society of Plant Microbe Interactions (JSPMI)
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6440725/ https://www.ncbi.nlm.nih.gov/pubmed/30760663 http://dx.doi.org/10.1264/jsme2.ME18101 |
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author | Suzuki, Kazuki Takemura, Manami Miki, Takaaki Nonaka, Masanori Harada, Naoki |
author_facet | Suzuki, Kazuki Takemura, Manami Miki, Takaaki Nonaka, Masanori Harada, Naoki |
author_sort | Suzuki, Kazuki |
collection | PubMed |
description | Soil bacterial community compositions and temporal changes in organic paddy fields were elucidated using a 16S rRNA gene amplicon sequencing analysis with a high-throughput next generation sequencer. At transplanting, bacterial community compositions in organic and conventional paddy fields were mostly similar despite differences in field management. The bacterial community composition in organic fields differed from that under conventional management during the rice growth period, possibly as a result of the decomposition process of organic fertilizers. However, differences in the frequency of tillage and photosynthetic bacterial inoculations in the organic plots had less of an impact on bacterial communities. |
format | Online Article Text |
id | pubmed-6440725 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | the Japanese Society of Microbial Ecology (JSME)/the Japanese Society of Soil Microbiology (JSSM)/the Taiwan Society of Microbial Ecology (TSME)/the Japanese Society of Plant Microbe Interactions (JSPMI) |
record_format | MEDLINE/PubMed |
spelling | pubmed-64407252019-04-10 Differences in Soil Bacterial Community Compositions in Paddy Fields under Organic and Conventional Farming Conditions Suzuki, Kazuki Takemura, Manami Miki, Takaaki Nonaka, Masanori Harada, Naoki Microbes Environ Short Communication Soil bacterial community compositions and temporal changes in organic paddy fields were elucidated using a 16S rRNA gene amplicon sequencing analysis with a high-throughput next generation sequencer. At transplanting, bacterial community compositions in organic and conventional paddy fields were mostly similar despite differences in field management. The bacterial community composition in organic fields differed from that under conventional management during the rice growth period, possibly as a result of the decomposition process of organic fertilizers. However, differences in the frequency of tillage and photosynthetic bacterial inoculations in the organic plots had less of an impact on bacterial communities. the Japanese Society of Microbial Ecology (JSME)/the Japanese Society of Soil Microbiology (JSSM)/the Taiwan Society of Microbial Ecology (TSME)/the Japanese Society of Plant Microbe Interactions (JSPMI) 2019-03 2019-02-13 /pmc/articles/PMC6440725/ /pubmed/30760663 http://dx.doi.org/10.1264/jsme2.ME18101 Text en Copyright © 2019 by Japanese Society of Microbial Ecology / Japanese Society of Soil Microbiology / Taiwan Society of Microbial Ecology / Japanese Society of Plant Microbe Interactions. http://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Short Communication Suzuki, Kazuki Takemura, Manami Miki, Takaaki Nonaka, Masanori Harada, Naoki Differences in Soil Bacterial Community Compositions in Paddy Fields under Organic and Conventional Farming Conditions |
title | Differences in Soil Bacterial Community Compositions in Paddy Fields under Organic and Conventional Farming Conditions |
title_full | Differences in Soil Bacterial Community Compositions in Paddy Fields under Organic and Conventional Farming Conditions |
title_fullStr | Differences in Soil Bacterial Community Compositions in Paddy Fields under Organic and Conventional Farming Conditions |
title_full_unstemmed | Differences in Soil Bacterial Community Compositions in Paddy Fields under Organic and Conventional Farming Conditions |
title_short | Differences in Soil Bacterial Community Compositions in Paddy Fields under Organic and Conventional Farming Conditions |
title_sort | differences in soil bacterial community compositions in paddy fields under organic and conventional farming conditions |
topic | Short Communication |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6440725/ https://www.ncbi.nlm.nih.gov/pubmed/30760663 http://dx.doi.org/10.1264/jsme2.ME18101 |
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