Cargando…

Differences in Soil Bacterial Community Compositions in Paddy Fields under Organic and Conventional Farming Conditions

Soil bacterial community compositions and temporal changes in organic paddy fields were elucidated using a 16S rRNA gene amplicon sequencing analysis with a high-throughput next generation sequencer. At transplanting, bacterial community compositions in organic and conventional paddy fields were mos...

Descripción completa

Detalles Bibliográficos
Autores principales: Suzuki, Kazuki, Takemura, Manami, Miki, Takaaki, Nonaka, Masanori, Harada, Naoki
Formato: Online Artículo Texto
Lenguaje:English
Publicado: the Japanese Society of Microbial Ecology (JSME)/the Japanese Society of Soil Microbiology (JSSM)/the Taiwan Society of Microbial Ecology (TSME)/the Japanese Society of Plant Microbe Interactions (JSPMI) 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6440725/
https://www.ncbi.nlm.nih.gov/pubmed/30760663
http://dx.doi.org/10.1264/jsme2.ME18101
_version_ 1783407438610825216
author Suzuki, Kazuki
Takemura, Manami
Miki, Takaaki
Nonaka, Masanori
Harada, Naoki
author_facet Suzuki, Kazuki
Takemura, Manami
Miki, Takaaki
Nonaka, Masanori
Harada, Naoki
author_sort Suzuki, Kazuki
collection PubMed
description Soil bacterial community compositions and temporal changes in organic paddy fields were elucidated using a 16S rRNA gene amplicon sequencing analysis with a high-throughput next generation sequencer. At transplanting, bacterial community compositions in organic and conventional paddy fields were mostly similar despite differences in field management. The bacterial community composition in organic fields differed from that under conventional management during the rice growth period, possibly as a result of the decomposition process of organic fertilizers. However, differences in the frequency of tillage and photosynthetic bacterial inoculations in the organic plots had less of an impact on bacterial communities.
format Online
Article
Text
id pubmed-6440725
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher the Japanese Society of Microbial Ecology (JSME)/the Japanese Society of Soil Microbiology (JSSM)/the Taiwan Society of Microbial Ecology (TSME)/the Japanese Society of Plant Microbe Interactions (JSPMI)
record_format MEDLINE/PubMed
spelling pubmed-64407252019-04-10 Differences in Soil Bacterial Community Compositions in Paddy Fields under Organic and Conventional Farming Conditions Suzuki, Kazuki Takemura, Manami Miki, Takaaki Nonaka, Masanori Harada, Naoki Microbes Environ Short Communication Soil bacterial community compositions and temporal changes in organic paddy fields were elucidated using a 16S rRNA gene amplicon sequencing analysis with a high-throughput next generation sequencer. At transplanting, bacterial community compositions in organic and conventional paddy fields were mostly similar despite differences in field management. The bacterial community composition in organic fields differed from that under conventional management during the rice growth period, possibly as a result of the decomposition process of organic fertilizers. However, differences in the frequency of tillage and photosynthetic bacterial inoculations in the organic plots had less of an impact on bacterial communities. the Japanese Society of Microbial Ecology (JSME)/the Japanese Society of Soil Microbiology (JSSM)/the Taiwan Society of Microbial Ecology (TSME)/the Japanese Society of Plant Microbe Interactions (JSPMI) 2019-03 2019-02-13 /pmc/articles/PMC6440725/ /pubmed/30760663 http://dx.doi.org/10.1264/jsme2.ME18101 Text en Copyright © 2019 by Japanese Society of Microbial Ecology / Japanese Society of Soil Microbiology / Taiwan Society of Microbial Ecology / Japanese Society of Plant Microbe Interactions. http://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Short Communication
Suzuki, Kazuki
Takemura, Manami
Miki, Takaaki
Nonaka, Masanori
Harada, Naoki
Differences in Soil Bacterial Community Compositions in Paddy Fields under Organic and Conventional Farming Conditions
title Differences in Soil Bacterial Community Compositions in Paddy Fields under Organic and Conventional Farming Conditions
title_full Differences in Soil Bacterial Community Compositions in Paddy Fields under Organic and Conventional Farming Conditions
title_fullStr Differences in Soil Bacterial Community Compositions in Paddy Fields under Organic and Conventional Farming Conditions
title_full_unstemmed Differences in Soil Bacterial Community Compositions in Paddy Fields under Organic and Conventional Farming Conditions
title_short Differences in Soil Bacterial Community Compositions in Paddy Fields under Organic and Conventional Farming Conditions
title_sort differences in soil bacterial community compositions in paddy fields under organic and conventional farming conditions
topic Short Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6440725/
https://www.ncbi.nlm.nih.gov/pubmed/30760663
http://dx.doi.org/10.1264/jsme2.ME18101
work_keys_str_mv AT suzukikazuki differencesinsoilbacterialcommunitycompositionsinpaddyfieldsunderorganicandconventionalfarmingconditions
AT takemuramanami differencesinsoilbacterialcommunitycompositionsinpaddyfieldsunderorganicandconventionalfarmingconditions
AT mikitakaaki differencesinsoilbacterialcommunitycompositionsinpaddyfieldsunderorganicandconventionalfarmingconditions
AT nonakamasanori differencesinsoilbacterialcommunitycompositionsinpaddyfieldsunderorganicandconventionalfarmingconditions
AT haradanaoki differencesinsoilbacterialcommunitycompositionsinpaddyfieldsunderorganicandconventionalfarmingconditions