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No signal of deleterious mutation accumulation in conserved gene sequences of extant asexual hexapods

Loss of sex and recombination is generally assumed to impede the effectiveness of purifying selection and to result in the accumulation of slightly deleterious mutations. Empirical evidence for this has come from several studies investigating mutational load in a small number of individual genes. Ho...

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Autores principales: Brandt, Alexander, Bast, Jens, Scheu, Stefan, Meusemann, Karen, Donath, Alexander, Schütte, Kai, Machida, Ryuichiro, Kraaijeveld, Ken
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6441085/
https://www.ncbi.nlm.nih.gov/pubmed/30926861
http://dx.doi.org/10.1038/s41598-019-41821-x
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author Brandt, Alexander
Bast, Jens
Scheu, Stefan
Meusemann, Karen
Donath, Alexander
Schütte, Kai
Machida, Ryuichiro
Kraaijeveld, Ken
author_facet Brandt, Alexander
Bast, Jens
Scheu, Stefan
Meusemann, Karen
Donath, Alexander
Schütte, Kai
Machida, Ryuichiro
Kraaijeveld, Ken
author_sort Brandt, Alexander
collection PubMed
description Loss of sex and recombination is generally assumed to impede the effectiveness of purifying selection and to result in the accumulation of slightly deleterious mutations. Empirical evidence for this has come from several studies investigating mutational load in a small number of individual genes. However, recent whole transcriptome based studies have yielded inconsistent results, hence questioning the validity of the assumption of mutational meltdown in asexual populations. Here, we study the effectiveness of purifying selection in eight asexual hexapod lineages and their sexual relatives, as present in the 1 K Insect Transcriptome Evolution (1KITE) project, covering eight hexapod groups. We analyse the accumulation of slightly deleterious nonsynonymous and synonymous point mutations in 99 single copy orthologue protein-coding loci shared among the investigated taxa. While accumulation rates of nonsynonymous mutations differed between genes and hexapod groups, we found no effect of reproductive mode on the effectiveness of purifying selection acting at nonsynonymous and synonymous sites. Although the setup of this study does not fully rule out nondetection of subtle effects, our data does not support the established consensus of asexual lineages undergoing ‘mutational meltdown’.
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spelling pubmed-64410852019-04-04 No signal of deleterious mutation accumulation in conserved gene sequences of extant asexual hexapods Brandt, Alexander Bast, Jens Scheu, Stefan Meusemann, Karen Donath, Alexander Schütte, Kai Machida, Ryuichiro Kraaijeveld, Ken Sci Rep Article Loss of sex and recombination is generally assumed to impede the effectiveness of purifying selection and to result in the accumulation of slightly deleterious mutations. Empirical evidence for this has come from several studies investigating mutational load in a small number of individual genes. However, recent whole transcriptome based studies have yielded inconsistent results, hence questioning the validity of the assumption of mutational meltdown in asexual populations. Here, we study the effectiveness of purifying selection in eight asexual hexapod lineages and their sexual relatives, as present in the 1 K Insect Transcriptome Evolution (1KITE) project, covering eight hexapod groups. We analyse the accumulation of slightly deleterious nonsynonymous and synonymous point mutations in 99 single copy orthologue protein-coding loci shared among the investigated taxa. While accumulation rates of nonsynonymous mutations differed between genes and hexapod groups, we found no effect of reproductive mode on the effectiveness of purifying selection acting at nonsynonymous and synonymous sites. Although the setup of this study does not fully rule out nondetection of subtle effects, our data does not support the established consensus of asexual lineages undergoing ‘mutational meltdown’. Nature Publishing Group UK 2019-03-29 /pmc/articles/PMC6441085/ /pubmed/30926861 http://dx.doi.org/10.1038/s41598-019-41821-x Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Brandt, Alexander
Bast, Jens
Scheu, Stefan
Meusemann, Karen
Donath, Alexander
Schütte, Kai
Machida, Ryuichiro
Kraaijeveld, Ken
No signal of deleterious mutation accumulation in conserved gene sequences of extant asexual hexapods
title No signal of deleterious mutation accumulation in conserved gene sequences of extant asexual hexapods
title_full No signal of deleterious mutation accumulation in conserved gene sequences of extant asexual hexapods
title_fullStr No signal of deleterious mutation accumulation in conserved gene sequences of extant asexual hexapods
title_full_unstemmed No signal of deleterious mutation accumulation in conserved gene sequences of extant asexual hexapods
title_short No signal of deleterious mutation accumulation in conserved gene sequences of extant asexual hexapods
title_sort no signal of deleterious mutation accumulation in conserved gene sequences of extant asexual hexapods
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6441085/
https://www.ncbi.nlm.nih.gov/pubmed/30926861
http://dx.doi.org/10.1038/s41598-019-41821-x
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