NMR-STAR: comprehensive ontology for representing, archiving and exchanging data from nuclear magnetic resonance spectroscopic experiments

The growth of the biological nuclear magnetic resonance (NMR) field and the development of new experimental technology have mandated the revision and enlargement of the NMR-STAR ontology used to represent experiments, spectral and derived data, and supporting metadata. We present here a brief descri...

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Autores principales: Ulrich, Eldon L., Baskaran, Kumaran, Dashti, Hesam, Ioannidis, Yannis E., Livny, Miron, Romero, Pedro R., Maziuk, Dimitri, Wedell, Jonathan R., Yao, Hongyang, Eghbalnia, Hamid R., Hoch, Jeffrey C., Markley, John L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Netherlands 2018
Materias:
Communication
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6441402/
https://www.ncbi.nlm.nih.gov/pubmed/30580387
http://dx.doi.org/10.1007/s10858-018-0220-3
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author Ulrich, Eldon L.
Baskaran, Kumaran
Dashti, Hesam
Ioannidis, Yannis E.
Livny, Miron
Romero, Pedro R.
Maziuk, Dimitri
Wedell, Jonathan R.
Yao, Hongyang
Eghbalnia, Hamid R.
Hoch, Jeffrey C.
Markley, John L.
author_facet Ulrich, Eldon L.
Baskaran, Kumaran
Dashti, Hesam
Ioannidis, Yannis E.
Livny, Miron
Romero, Pedro R.
Maziuk, Dimitri
Wedell, Jonathan R.
Yao, Hongyang
Eghbalnia, Hamid R.
Hoch, Jeffrey C.
Markley, John L.
author_sort Ulrich, Eldon L.
collection PubMed
description The growth of the biological nuclear magnetic resonance (NMR) field and the development of new experimental technology have mandated the revision and enlargement of the NMR-STAR ontology used to represent experiments, spectral and derived data, and supporting metadata. We present here a brief description of the NMR-STAR ontology and software tools for manipulating NMR-STAR data files, editing the files, extracting selected data, and creating data visualizations. Detailed information on these is accessible from the links provided.
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spelling pubmed-64414022019-03-31 NMR-STAR: comprehensive ontology for representing, archiving and exchanging data from nuclear magnetic resonance spectroscopic experiments Ulrich, Eldon L. Baskaran, Kumaran Dashti, Hesam Ioannidis, Yannis E. Livny, Miron Romero, Pedro R. Maziuk, Dimitri Wedell, Jonathan R. Yao, Hongyang Eghbalnia, Hamid R. Hoch, Jeffrey C. Markley, John L. J Biomol NMR Communication The growth of the biological nuclear magnetic resonance (NMR) field and the development of new experimental technology have mandated the revision and enlargement of the NMR-STAR ontology used to represent experiments, spectral and derived data, and supporting metadata. We present here a brief description of the NMR-STAR ontology and software tools for manipulating NMR-STAR data files, editing the files, extracting selected data, and creating data visualizations. Detailed information on these is accessible from the links provided. Springer Netherlands 2018-12-22 2019 /pmc/articles/PMC6441402/ /pubmed/30580387 http://dx.doi.org/10.1007/s10858-018-0220-3 Text en © The Author(s) 2018 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.
spellingShingle Communication
Ulrich, Eldon L.
Baskaran, Kumaran
Dashti, Hesam
Ioannidis, Yannis E.
Livny, Miron
Romero, Pedro R.
Maziuk, Dimitri
Wedell, Jonathan R.
Yao, Hongyang
Eghbalnia, Hamid R.
Hoch, Jeffrey C.
Markley, John L.
NMR-STAR: comprehensive ontology for representing, archiving and exchanging data from nuclear magnetic resonance spectroscopic experiments
title NMR-STAR: comprehensive ontology for representing, archiving and exchanging data from nuclear magnetic resonance spectroscopic experiments
title_full NMR-STAR: comprehensive ontology for representing, archiving and exchanging data from nuclear magnetic resonance spectroscopic experiments
title_fullStr NMR-STAR: comprehensive ontology for representing, archiving and exchanging data from nuclear magnetic resonance spectroscopic experiments
title_full_unstemmed NMR-STAR: comprehensive ontology for representing, archiving and exchanging data from nuclear magnetic resonance spectroscopic experiments
title_short NMR-STAR: comprehensive ontology for representing, archiving and exchanging data from nuclear magnetic resonance spectroscopic experiments
title_sort nmr-star: comprehensive ontology for representing, archiving and exchanging data from nuclear magnetic resonance spectroscopic experiments
topic Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6441402/
https://www.ncbi.nlm.nih.gov/pubmed/30580387
http://dx.doi.org/10.1007/s10858-018-0220-3
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