Cargando…
Detection of human papillomavirus in cases of head and neck squamous cell carcinoma by RNA‐seq and VirTect
Next‐generation sequencing provides an opportunity to detect viral species from RNA‐seq data of human tissues, but existing computational approaches do not perform optimally on clinical samples. We developed a bioinformatic method called VirTect for detecting viruses in neoplastic human tissues usin...
Autores principales: | Khan, Atlas, Liu, Qian, Chen, Xuelian, Stucky, Andres, Sedghizadeh, Parish P., Adelpour, Daniel, Zhang, Xi, Wang, Kai, Zhong, Jiang F. |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6441885/ https://www.ncbi.nlm.nih.gov/pubmed/30597724 http://dx.doi.org/10.1002/1878-0261.12435 |
Ejemplares similares
-
Detecting virus integration sites based on multiple related sequencing data by VirTect
por: Xia, Yuchao, et al.
Publicado: (2019) -
Single-cell genomic analysis of head and neck squamous cell carcinoma
por: Stucky, Andres, et al.
Publicado: (2017) -
Genomic Analysis of Oral Lichen Planus and Related Oral Microbiome Pathogens
por: Zhong, Evelyn F., et al.
Publicado: (2020) -
Human papillomavirus detection in head and neck squamous cell carcinoma
por: Vietía, Dayahindara, et al.
Publicado: (2014) -
ProTECT—Prediction of T-Cell Epitopes for Cancer Therapy
por: Rao, Arjun A., et al.
Publicado: (2020)