Cargando…

EpiRank: Modeling Bidirectional Disease Spread in Asymmetric Commuting Networks

Commuting network flows are generally asymmetrical, with commuting behaviors bi-directionally balanced between home and work locations, and with weekday commutes providing many opportunities for the spread of infectious diseases via direct and indirect physical contact. The authors use a Markov chai...

Descripción completa

Detalles Bibliográficos
Autores principales: Huang, Chung-Yuan, Chin, Wei-Chien-Benny, Wen, Tzai-Hung, Fu, Yu-Hsiang, Tsai, Yu-Shiuan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6443646/
https://www.ncbi.nlm.nih.gov/pubmed/30931968
http://dx.doi.org/10.1038/s41598-019-41719-8
_version_ 1783407873107165184
author Huang, Chung-Yuan
Chin, Wei-Chien-Benny
Wen, Tzai-Hung
Fu, Yu-Hsiang
Tsai, Yu-Shiuan
author_facet Huang, Chung-Yuan
Chin, Wei-Chien-Benny
Wen, Tzai-Hung
Fu, Yu-Hsiang
Tsai, Yu-Shiuan
author_sort Huang, Chung-Yuan
collection PubMed
description Commuting network flows are generally asymmetrical, with commuting behaviors bi-directionally balanced between home and work locations, and with weekday commutes providing many opportunities for the spread of infectious diseases via direct and indirect physical contact. The authors use a Markov chain model and PageRank-like algorithm to construct a novel algorithm called EpiRank to measure infection risk in a spatially confined commuting network on Taiwan island. Data from the country’s 2000 census were used to map epidemic risk distribution as a commuting network function. A daytime parameter was used to integrate forward and backward movement in order to analyze daily commuting patterns. EpiRank algorithm results were tested by comparing calculations with actual disease distributions for the 2009 H1N1 influenza outbreak and enterovirus cases between 2000 and 2008. Results suggest that the bidirectional movement model outperformed models that considered forward or backward direction only in terms of capturing spatial epidemic risk distribution. EpiRank also outperformed models based on network indexes such as PageRank and HITS. According to a sensitivity analysis of the daytime parameter, the backward movement effect is more important than the forward movement effect for understanding a commuting network’s disease diffusion structure. Our evidence supports the use of EpiRank as an alternative network measure for analyzing disease diffusion in a commuting network.
format Online
Article
Text
id pubmed-6443646
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-64436462019-04-05 EpiRank: Modeling Bidirectional Disease Spread in Asymmetric Commuting Networks Huang, Chung-Yuan Chin, Wei-Chien-Benny Wen, Tzai-Hung Fu, Yu-Hsiang Tsai, Yu-Shiuan Sci Rep Article Commuting network flows are generally asymmetrical, with commuting behaviors bi-directionally balanced between home and work locations, and with weekday commutes providing many opportunities for the spread of infectious diseases via direct and indirect physical contact. The authors use a Markov chain model and PageRank-like algorithm to construct a novel algorithm called EpiRank to measure infection risk in a spatially confined commuting network on Taiwan island. Data from the country’s 2000 census were used to map epidemic risk distribution as a commuting network function. A daytime parameter was used to integrate forward and backward movement in order to analyze daily commuting patterns. EpiRank algorithm results were tested by comparing calculations with actual disease distributions for the 2009 H1N1 influenza outbreak and enterovirus cases between 2000 and 2008. Results suggest that the bidirectional movement model outperformed models that considered forward or backward direction only in terms of capturing spatial epidemic risk distribution. EpiRank also outperformed models based on network indexes such as PageRank and HITS. According to a sensitivity analysis of the daytime parameter, the backward movement effect is more important than the forward movement effect for understanding a commuting network’s disease diffusion structure. Our evidence supports the use of EpiRank as an alternative network measure for analyzing disease diffusion in a commuting network. Nature Publishing Group UK 2019-04-01 /pmc/articles/PMC6443646/ /pubmed/30931968 http://dx.doi.org/10.1038/s41598-019-41719-8 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Huang, Chung-Yuan
Chin, Wei-Chien-Benny
Wen, Tzai-Hung
Fu, Yu-Hsiang
Tsai, Yu-Shiuan
EpiRank: Modeling Bidirectional Disease Spread in Asymmetric Commuting Networks
title EpiRank: Modeling Bidirectional Disease Spread in Asymmetric Commuting Networks
title_full EpiRank: Modeling Bidirectional Disease Spread in Asymmetric Commuting Networks
title_fullStr EpiRank: Modeling Bidirectional Disease Spread in Asymmetric Commuting Networks
title_full_unstemmed EpiRank: Modeling Bidirectional Disease Spread in Asymmetric Commuting Networks
title_short EpiRank: Modeling Bidirectional Disease Spread in Asymmetric Commuting Networks
title_sort epirank: modeling bidirectional disease spread in asymmetric commuting networks
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6443646/
https://www.ncbi.nlm.nih.gov/pubmed/30931968
http://dx.doi.org/10.1038/s41598-019-41719-8
work_keys_str_mv AT huangchungyuan epirankmodelingbidirectionaldiseasespreadinasymmetriccommutingnetworks
AT chinweichienbenny epirankmodelingbidirectionaldiseasespreadinasymmetriccommutingnetworks
AT wentzaihung epirankmodelingbidirectionaldiseasespreadinasymmetriccommutingnetworks
AT fuyuhsiang epirankmodelingbidirectionaldiseasespreadinasymmetriccommutingnetworks
AT tsaiyushiuan epirankmodelingbidirectionaldiseasespreadinasymmetriccommutingnetworks