Cargando…

Bistable behaviour and medium-dependent post-translational regulation of the tryptophanase operon regulatory pathway in Echerichia coli

The present work is aimed at studying the dynamic behaviour of the tryptopnanase (tna) operon, which encodes the proteins necessary to uptake and metabolise tryptophan to use it as a carbon source in the absence of glucose. To this end, we designed a micro-bioreactor capable of driving a bacterial c...

Descripción completa

Detalles Bibliográficos
Autores principales: Orozco-Gómez, David I., Sosa-Hernández, Juan Eduardo, Gallardo-Navarro, Óscar Adrián, Santana-Solano, Jesús, Santillán, Moisés
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6443796/
https://www.ncbi.nlm.nih.gov/pubmed/30931970
http://dx.doi.org/10.1038/s41598-019-41856-0
_version_ 1783407897222316032
author Orozco-Gómez, David I.
Sosa-Hernández, Juan Eduardo
Gallardo-Navarro, Óscar Adrián
Santana-Solano, Jesús
Santillán, Moisés
author_facet Orozco-Gómez, David I.
Sosa-Hernández, Juan Eduardo
Gallardo-Navarro, Óscar Adrián
Santana-Solano, Jesús
Santillán, Moisés
author_sort Orozco-Gómez, David I.
collection PubMed
description The present work is aimed at studying the dynamic behaviour of the tryptopnanase (tna) operon, which encodes the proteins necessary to uptake and metabolise tryptophan to use it as a carbon source in the absence of glucose. To this end, we designed a micro-bioreactor capable of driving a bacterial culture to a stationary state. This allowed us to explore (at the single cell level) the tna operon steady-state dynamics under multiple culture conditions. Our experimental results suggest that the tna operon is bistable for a specific range of environmental tryptophan and glucose concentrations, and evidence that both reagents play a role on the activation of the enzyme in charge of metabolising tryptophan: tryptophanase (TnaA). Based on our experimental data and the already known regulatory mechanisms, we developed a mathematical model for the tna operon regulatory pathway. Our modelling results reinforce the claim that the tna operon is bistable, and further suggest that the activity of enzyme TnaA is regulated by the environmental levels of glucose and tryptophan via a common signalling pathway. Possible biological implications of our findings are further discussed.
format Online
Article
Text
id pubmed-6443796
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-64437962019-04-05 Bistable behaviour and medium-dependent post-translational regulation of the tryptophanase operon regulatory pathway in Echerichia coli Orozco-Gómez, David I. Sosa-Hernández, Juan Eduardo Gallardo-Navarro, Óscar Adrián Santana-Solano, Jesús Santillán, Moisés Sci Rep Article The present work is aimed at studying the dynamic behaviour of the tryptopnanase (tna) operon, which encodes the proteins necessary to uptake and metabolise tryptophan to use it as a carbon source in the absence of glucose. To this end, we designed a micro-bioreactor capable of driving a bacterial culture to a stationary state. This allowed us to explore (at the single cell level) the tna operon steady-state dynamics under multiple culture conditions. Our experimental results suggest that the tna operon is bistable for a specific range of environmental tryptophan and glucose concentrations, and evidence that both reagents play a role on the activation of the enzyme in charge of metabolising tryptophan: tryptophanase (TnaA). Based on our experimental data and the already known regulatory mechanisms, we developed a mathematical model for the tna operon regulatory pathway. Our modelling results reinforce the claim that the tna operon is bistable, and further suggest that the activity of enzyme TnaA is regulated by the environmental levels of glucose and tryptophan via a common signalling pathway. Possible biological implications of our findings are further discussed. Nature Publishing Group UK 2019-04-01 /pmc/articles/PMC6443796/ /pubmed/30931970 http://dx.doi.org/10.1038/s41598-019-41856-0 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Orozco-Gómez, David I.
Sosa-Hernández, Juan Eduardo
Gallardo-Navarro, Óscar Adrián
Santana-Solano, Jesús
Santillán, Moisés
Bistable behaviour and medium-dependent post-translational regulation of the tryptophanase operon regulatory pathway in Echerichia coli
title Bistable behaviour and medium-dependent post-translational regulation of the tryptophanase operon regulatory pathway in Echerichia coli
title_full Bistable behaviour and medium-dependent post-translational regulation of the tryptophanase operon regulatory pathway in Echerichia coli
title_fullStr Bistable behaviour and medium-dependent post-translational regulation of the tryptophanase operon regulatory pathway in Echerichia coli
title_full_unstemmed Bistable behaviour and medium-dependent post-translational regulation of the tryptophanase operon regulatory pathway in Echerichia coli
title_short Bistable behaviour and medium-dependent post-translational regulation of the tryptophanase operon regulatory pathway in Echerichia coli
title_sort bistable behaviour and medium-dependent post-translational regulation of the tryptophanase operon regulatory pathway in echerichia coli
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6443796/
https://www.ncbi.nlm.nih.gov/pubmed/30931970
http://dx.doi.org/10.1038/s41598-019-41856-0
work_keys_str_mv AT orozcogomezdavidi bistablebehaviourandmediumdependentposttranslationalregulationofthetryptophanaseoperonregulatorypathwayinecherichiacoli
AT sosahernandezjuaneduardo bistablebehaviourandmediumdependentposttranslationalregulationofthetryptophanaseoperonregulatorypathwayinecherichiacoli
AT gallardonavarrooscaradrian bistablebehaviourandmediumdependentposttranslationalregulationofthetryptophanaseoperonregulatorypathwayinecherichiacoli
AT santanasolanojesus bistablebehaviourandmediumdependentposttranslationalregulationofthetryptophanaseoperonregulatorypathwayinecherichiacoli
AT santillanmoises bistablebehaviourandmediumdependentposttranslationalregulationofthetryptophanaseoperonregulatorypathwayinecherichiacoli