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Genetic features associated with (18)F-FDG uptake in intrahepatic cholangiocarcinoma
PURPOSE: In intrahepatic cholangiocarcinoma (iCCA), genetic characteristics on (18)F-fluorodeoxyglucose ((18)F-FDG)-PET scans are not yet clarified. If specific genetic characteristics were found to be related to FDG uptake in iCCA, we can predict molecular features based on the FDG uptake patterns...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Korean Surgical Society
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6444048/ https://www.ncbi.nlm.nih.gov/pubmed/30941318 http://dx.doi.org/10.4174/astr.2019.96.4.153 |
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author | Ahn, Keun Soo Kang, Koo Jeong Kim, Yong Hoon Kim, Tae-Seok Song, Bong-Il Kim, Hae Won O'Brien, Daniel Roberts, Lewis R. Lee, Jeong Woo Won, Kyoung Sook |
author_facet | Ahn, Keun Soo Kang, Koo Jeong Kim, Yong Hoon Kim, Tae-Seok Song, Bong-Il Kim, Hae Won O'Brien, Daniel Roberts, Lewis R. Lee, Jeong Woo Won, Kyoung Sook |
author_sort | Ahn, Keun Soo |
collection | PubMed |
description | PURPOSE: In intrahepatic cholangiocarcinoma (iCCA), genetic characteristics on (18)F-fluorodeoxyglucose ((18)F-FDG)-PET scans are not yet clarified. If specific genetic characteristics were found to be related to FDG uptake in iCCA, we can predict molecular features based on the FDG uptake patterns and to distinguish different types of treatments. In this purpose, we analyzed RNA sequencing in iCCA patients to evaluate gene expression signatures associated with FDG uptake patterns. METHODS: We performed RNA sequencing of 22 cases iCCA who underwent preoperative (18)F-FDG-PET, and analyzed the clinical and molecular features according to the maximum standard uptake value (SUVmax). Genes and biological pathway which are associated with SUVmax were analyzed. RESULTS: Patients with SUVmax higher than 9.0 (n = 9) had poorer disease-free survival than those with lower SUVmax (n = 13, P = 0.035). Genes related to glycolysis and gluconeogenesis, phosphorylation and cell cycle were significantly correlated with SUVmax (r ≥ 0.5). RRM2, which is related to the toxicity of Gemcitabine was positively correlated with SUVmax, and SLC27A2 which is associated with Cisplastin response was negatively correlated with SUVmax. According to the pathway analysis, cell cycle, cell division, hypoxia, inflammatory, and metabolism-related pathways were enriched in high SUVmax patients. CONCLUSION: The genomic features of gene expression and pathways can be predicted by FDG uptake features in iCCA. Patients with high FDG uptake have enriched cell cycle, metabolism and hypoxic pathways, which may lead to a more rational targeted treatment approach. |
format | Online Article Text |
id | pubmed-6444048 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | The Korean Surgical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-64440482019-04-02 Genetic features associated with (18)F-FDG uptake in intrahepatic cholangiocarcinoma Ahn, Keun Soo Kang, Koo Jeong Kim, Yong Hoon Kim, Tae-Seok Song, Bong-Il Kim, Hae Won O'Brien, Daniel Roberts, Lewis R. Lee, Jeong Woo Won, Kyoung Sook Ann Surg Treat Res Original Article PURPOSE: In intrahepatic cholangiocarcinoma (iCCA), genetic characteristics on (18)F-fluorodeoxyglucose ((18)F-FDG)-PET scans are not yet clarified. If specific genetic characteristics were found to be related to FDG uptake in iCCA, we can predict molecular features based on the FDG uptake patterns and to distinguish different types of treatments. In this purpose, we analyzed RNA sequencing in iCCA patients to evaluate gene expression signatures associated with FDG uptake patterns. METHODS: We performed RNA sequencing of 22 cases iCCA who underwent preoperative (18)F-FDG-PET, and analyzed the clinical and molecular features according to the maximum standard uptake value (SUVmax). Genes and biological pathway which are associated with SUVmax were analyzed. RESULTS: Patients with SUVmax higher than 9.0 (n = 9) had poorer disease-free survival than those with lower SUVmax (n = 13, P = 0.035). Genes related to glycolysis and gluconeogenesis, phosphorylation and cell cycle were significantly correlated with SUVmax (r ≥ 0.5). RRM2, which is related to the toxicity of Gemcitabine was positively correlated with SUVmax, and SLC27A2 which is associated with Cisplastin response was negatively correlated with SUVmax. According to the pathway analysis, cell cycle, cell division, hypoxia, inflammatory, and metabolism-related pathways were enriched in high SUVmax patients. CONCLUSION: The genomic features of gene expression and pathways can be predicted by FDG uptake features in iCCA. Patients with high FDG uptake have enriched cell cycle, metabolism and hypoxic pathways, which may lead to a more rational targeted treatment approach. The Korean Surgical Society 2019-04 2019-03-28 /pmc/articles/PMC6444048/ /pubmed/30941318 http://dx.doi.org/10.4174/astr.2019.96.4.153 Text en Copyright © 2019, the Korean Surgical Society http://creativecommons.org/licenses/by-nc/4.0/ Annals of Surgical Treatment and Research is an Open Access Journal. All articles are distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article Ahn, Keun Soo Kang, Koo Jeong Kim, Yong Hoon Kim, Tae-Seok Song, Bong-Il Kim, Hae Won O'Brien, Daniel Roberts, Lewis R. Lee, Jeong Woo Won, Kyoung Sook Genetic features associated with (18)F-FDG uptake in intrahepatic cholangiocarcinoma |
title | Genetic features associated with (18)F-FDG uptake in intrahepatic cholangiocarcinoma |
title_full | Genetic features associated with (18)F-FDG uptake in intrahepatic cholangiocarcinoma |
title_fullStr | Genetic features associated with (18)F-FDG uptake in intrahepatic cholangiocarcinoma |
title_full_unstemmed | Genetic features associated with (18)F-FDG uptake in intrahepatic cholangiocarcinoma |
title_short | Genetic features associated with (18)F-FDG uptake in intrahepatic cholangiocarcinoma |
title_sort | genetic features associated with (18)f-fdg uptake in intrahepatic cholangiocarcinoma |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6444048/ https://www.ncbi.nlm.nih.gov/pubmed/30941318 http://dx.doi.org/10.4174/astr.2019.96.4.153 |
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