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Automated and Reproducible Detection of Vascular Endothelial Growth Factor (VEGF) in Renal Tissue Sections

BACKGROUND: Manual analysis of tissue sections, such as for pathological diagnosis, requires an analyst with substantial knowledge and experience. Reproducible image analysis of biological samples is steadily gaining scientific importance. The aim of the present study was to employ image analysis fo...

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Autores principales: Macedo, Nayana Damiani, Buzin, Aline Rodrigues, de Araujo, Isabela Bastos, Nogueira, Breno Valentim, Andrade, Tadeu Uggere, Endringer, Denise Coutinho, Lenz, Dominik
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6444260/
https://www.ncbi.nlm.nih.gov/pubmed/31016206
http://dx.doi.org/10.1155/2019/7232781
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author Macedo, Nayana Damiani
Buzin, Aline Rodrigues
de Araujo, Isabela Bastos
Nogueira, Breno Valentim
Andrade, Tadeu Uggere
Endringer, Denise Coutinho
Lenz, Dominik
author_facet Macedo, Nayana Damiani
Buzin, Aline Rodrigues
de Araujo, Isabela Bastos
Nogueira, Breno Valentim
Andrade, Tadeu Uggere
Endringer, Denise Coutinho
Lenz, Dominik
author_sort Macedo, Nayana Damiani
collection PubMed
description BACKGROUND: Manual analysis of tissue sections, such as for pathological diagnosis, requires an analyst with substantial knowledge and experience. Reproducible image analysis of biological samples is steadily gaining scientific importance. The aim of the present study was to employ image analysis followed by machine learning to identify vascular endothelial growth factor (VEGF) in kidney tissue that had been subjected to hypoxia. METHODS: Light microscopy images of renal tissue sections stained for VEGF were analyzed. Subsequently, machine learning classified the cells as VEGF(+) and VEGF(−) cells. RESULTS: VEGF was detected and cells were counted with high sensitivity and specificity. CONCLUSION: With great clinical, diagnostic, and research potential, automatic image analysis offers a new quantitative capability, thereby adding numerical information to a mostly qualitative diagnostic approach.
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spelling pubmed-64442602019-04-23 Automated and Reproducible Detection of Vascular Endothelial Growth Factor (VEGF) in Renal Tissue Sections Macedo, Nayana Damiani Buzin, Aline Rodrigues de Araujo, Isabela Bastos Nogueira, Breno Valentim Andrade, Tadeu Uggere Endringer, Denise Coutinho Lenz, Dominik J Immunol Res Research Article BACKGROUND: Manual analysis of tissue sections, such as for pathological diagnosis, requires an analyst with substantial knowledge and experience. Reproducible image analysis of biological samples is steadily gaining scientific importance. The aim of the present study was to employ image analysis followed by machine learning to identify vascular endothelial growth factor (VEGF) in kidney tissue that had been subjected to hypoxia. METHODS: Light microscopy images of renal tissue sections stained for VEGF were analyzed. Subsequently, machine learning classified the cells as VEGF(+) and VEGF(−) cells. RESULTS: VEGF was detected and cells were counted with high sensitivity and specificity. CONCLUSION: With great clinical, diagnostic, and research potential, automatic image analysis offers a new quantitative capability, thereby adding numerical information to a mostly qualitative diagnostic approach. Hindawi 2019-03-19 /pmc/articles/PMC6444260/ /pubmed/31016206 http://dx.doi.org/10.1155/2019/7232781 Text en Copyright © 2019 Nayana Damiani Macedo et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Macedo, Nayana Damiani
Buzin, Aline Rodrigues
de Araujo, Isabela Bastos
Nogueira, Breno Valentim
Andrade, Tadeu Uggere
Endringer, Denise Coutinho
Lenz, Dominik
Automated and Reproducible Detection of Vascular Endothelial Growth Factor (VEGF) in Renal Tissue Sections
title Automated and Reproducible Detection of Vascular Endothelial Growth Factor (VEGF) in Renal Tissue Sections
title_full Automated and Reproducible Detection of Vascular Endothelial Growth Factor (VEGF) in Renal Tissue Sections
title_fullStr Automated and Reproducible Detection of Vascular Endothelial Growth Factor (VEGF) in Renal Tissue Sections
title_full_unstemmed Automated and Reproducible Detection of Vascular Endothelial Growth Factor (VEGF) in Renal Tissue Sections
title_short Automated and Reproducible Detection of Vascular Endothelial Growth Factor (VEGF) in Renal Tissue Sections
title_sort automated and reproducible detection of vascular endothelial growth factor (vegf) in renal tissue sections
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6444260/
https://www.ncbi.nlm.nih.gov/pubmed/31016206
http://dx.doi.org/10.1155/2019/7232781
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