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Automated and Reproducible Detection of Vascular Endothelial Growth Factor (VEGF) in Renal Tissue Sections
BACKGROUND: Manual analysis of tissue sections, such as for pathological diagnosis, requires an analyst with substantial knowledge and experience. Reproducible image analysis of biological samples is steadily gaining scientific importance. The aim of the present study was to employ image analysis fo...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6444260/ https://www.ncbi.nlm.nih.gov/pubmed/31016206 http://dx.doi.org/10.1155/2019/7232781 |
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author | Macedo, Nayana Damiani Buzin, Aline Rodrigues de Araujo, Isabela Bastos Nogueira, Breno Valentim Andrade, Tadeu Uggere Endringer, Denise Coutinho Lenz, Dominik |
author_facet | Macedo, Nayana Damiani Buzin, Aline Rodrigues de Araujo, Isabela Bastos Nogueira, Breno Valentim Andrade, Tadeu Uggere Endringer, Denise Coutinho Lenz, Dominik |
author_sort | Macedo, Nayana Damiani |
collection | PubMed |
description | BACKGROUND: Manual analysis of tissue sections, such as for pathological diagnosis, requires an analyst with substantial knowledge and experience. Reproducible image analysis of biological samples is steadily gaining scientific importance. The aim of the present study was to employ image analysis followed by machine learning to identify vascular endothelial growth factor (VEGF) in kidney tissue that had been subjected to hypoxia. METHODS: Light microscopy images of renal tissue sections stained for VEGF were analyzed. Subsequently, machine learning classified the cells as VEGF(+) and VEGF(−) cells. RESULTS: VEGF was detected and cells were counted with high sensitivity and specificity. CONCLUSION: With great clinical, diagnostic, and research potential, automatic image analysis offers a new quantitative capability, thereby adding numerical information to a mostly qualitative diagnostic approach. |
format | Online Article Text |
id | pubmed-6444260 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Hindawi |
record_format | MEDLINE/PubMed |
spelling | pubmed-64442602019-04-23 Automated and Reproducible Detection of Vascular Endothelial Growth Factor (VEGF) in Renal Tissue Sections Macedo, Nayana Damiani Buzin, Aline Rodrigues de Araujo, Isabela Bastos Nogueira, Breno Valentim Andrade, Tadeu Uggere Endringer, Denise Coutinho Lenz, Dominik J Immunol Res Research Article BACKGROUND: Manual analysis of tissue sections, such as for pathological diagnosis, requires an analyst with substantial knowledge and experience. Reproducible image analysis of biological samples is steadily gaining scientific importance. The aim of the present study was to employ image analysis followed by machine learning to identify vascular endothelial growth factor (VEGF) in kidney tissue that had been subjected to hypoxia. METHODS: Light microscopy images of renal tissue sections stained for VEGF were analyzed. Subsequently, machine learning classified the cells as VEGF(+) and VEGF(−) cells. RESULTS: VEGF was detected and cells were counted with high sensitivity and specificity. CONCLUSION: With great clinical, diagnostic, and research potential, automatic image analysis offers a new quantitative capability, thereby adding numerical information to a mostly qualitative diagnostic approach. Hindawi 2019-03-19 /pmc/articles/PMC6444260/ /pubmed/31016206 http://dx.doi.org/10.1155/2019/7232781 Text en Copyright © 2019 Nayana Damiani Macedo et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Macedo, Nayana Damiani Buzin, Aline Rodrigues de Araujo, Isabela Bastos Nogueira, Breno Valentim Andrade, Tadeu Uggere Endringer, Denise Coutinho Lenz, Dominik Automated and Reproducible Detection of Vascular Endothelial Growth Factor (VEGF) in Renal Tissue Sections |
title | Automated and Reproducible Detection of Vascular Endothelial Growth Factor (VEGF) in Renal Tissue Sections |
title_full | Automated and Reproducible Detection of Vascular Endothelial Growth Factor (VEGF) in Renal Tissue Sections |
title_fullStr | Automated and Reproducible Detection of Vascular Endothelial Growth Factor (VEGF) in Renal Tissue Sections |
title_full_unstemmed | Automated and Reproducible Detection of Vascular Endothelial Growth Factor (VEGF) in Renal Tissue Sections |
title_short | Automated and Reproducible Detection of Vascular Endothelial Growth Factor (VEGF) in Renal Tissue Sections |
title_sort | automated and reproducible detection of vascular endothelial growth factor (vegf) in renal tissue sections |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6444260/ https://www.ncbi.nlm.nih.gov/pubmed/31016206 http://dx.doi.org/10.1155/2019/7232781 |
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