Cargando…

A set of novel SNP loci for differentiating continental populations and three Chinese populations

In recent years, forensic geneticists have begun to develop some ancestry informative marker (AIM) panels for ancestry analysis of regional populations. In this study, we chose 48 single nucleotide polymorphisms (SNPs) from SPSmart database to infer ancestry origins of continental populations and Ch...

Descripción completa

Detalles Bibliográficos
Autores principales:	Jin, Xiao-Ye, Wei, Yuan-Yuan, Lan, Qiong, Cui, Wei, Chen, Chong, Guo, Yu-Xin, Fang, Ya-Ting, Zhu, Bo-Feng
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	PeerJ Inc. 2019
Materias:	Bioinformatics
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6445247/ https://www.ncbi.nlm.nih.gov/pubmed/30956897 http://dx.doi.org/10.7717/peerj.6508

Ejemplares similares

DiscoSnp-RAD: de novo detection of small variants for RAD-Seq population genomics
por: Gauthier, Jérémy, et al.
Publicado: (2020)

Predicting gene expression using DNA methylation in three human populations
por: Zhong, Huan, et al.
Publicado: (2019)

minSNPs: an R package for the derivation of resolution-optimised SNP sets from microbial genomic data
por: Hoon, Kian Soon, et al.
Publicado: (2023)

APC gene 3′UTR SNPs and interactions with environmental factors are correlated with risk of colorectal cancer in Chinese Han population
por: Ying, Rongbiao, et al.
Publicado: (2020)

Transcriptome sequencing and SNP detection in Phoebe chekiangensis
por: He, Bing, et al.
Publicado: (2017)

Comparing local ancestry inference models in populations of two- and three-way admixture
por: Schubert, Ryan, et al.
Publicado: (2020)

Compositional distinction of gut microbiota between Han Chinese and Tibetan populations with liver cirrhosis
por: Huan, Hui, et al.
Publicado: (2021)

Identification of key genes and biological pathways in Chinese lung cancer population using bioinformatics analysis
por: Liu, Ping, et al.
Publicado: (2022)

Driver gene alterations profiling of Chinese non‐small cell lung cancer and the effects of co‐occurring alterations on immunotherapy
por: Sun, Shengjie, et al.
Publicado: (2021)

Long non-coding RNA polymorphisms on 8q24 are associated with the prognosis of gastric cancer in a Chinese population
por: Zhang, Yangyu, et al.
Publicado: (2020)

The metabolic core of the prokaryotic community from deep-sea sediments of the southern Gulf of Mexico shows different functional signatures between the continental slope and abyssal plain
por: Torres-Beltrán, Mónica, et al.
Publicado: (2021)

Detection and variability analyses of CRISPR-like loci in the H. pylori genome
por: García-Zea, Jerson Alexander, et al.
Publicado: (2019)

Nomogram for predicting cancer specific survival in inflammatory breast carcinoma: a SEER population-based study
por: Zhang, Haige, et al.
Publicado: (2019)

Plasma miRNA profiles associated with stable warfarin dosage in Chinese patients
por: Zhao, Li, et al.
Publicado: (2020)

Methylation of CYP1A1 and VKORC1 promoter associated with stable dosage of warfarin in Chinese patients
por: He, Shiwei, et al.
Publicado: (2021)

RNAStat: An Integrated Tool for Statistical Analysis of RNA 3D Structures
por: Guo, Zhi-Hao, et al.
Publicado: (2022)

Variant profiling of evolving prokaryotic populations
por: Zojer, Markus, et al.
Publicado: (2017)

Integrated probability of coronary heart disease subject to the −308 tumor necrosis factor-alpha SNP: a Bayesian meta-analysis
por: Carvalho, C. Sofia
Publicado: (2015)

Recalibration of mapping quality scores in Illumina short-read alignments improves SNP detection results in low-coverage sequencing data
por: Cline, Eliot, et al.
Publicado: (2020)

Discriminating three motor imagery states of the same joint for brain-computer interface
por: Guan, Shan, et al.
Publicado: (2021)

Population Genetic Diversity and Clustering Analysis for Chinese Dongxiang Group With 30 Autosomal InDel Loci Simultaneously Analyzed
por: Zhu, Bofeng, et al.
Publicado: (2018)

The prognostic performance of the log odds of positive lymph nodes in patients with esophageal squamous cell carcinoma: A population study of the US SEER database and a Chinese single‐institution cohort
por: Zhang, Hongdian, et al.
Publicado: (2021)

Nomogram to predict the prognosis of parotid gland mucoepidermoid carcinoma: a population-based study of 1306 cases
por: Sun, Jian, et al.
Publicado: (2019)

SNP-SNP interactions of three new pri-miRNAs with the target gene PGC and multidimensional analysis of H. pylori in the gastric cancer/atrophic gastritis risk in a Chinese population
por: Xu, Qian, et al.
Publicado: (2016)

PopAlu: population-scale detection of Alu polymorphisms
por: Qian, Yu, et al.
Publicado: (2015)

Visualising disease trajectories from population-wide data
por: Hjaltelin, Jessica Xin, et al.
Publicado: (2023)

Unexpected selection to retain high GC content and splicing enhancers within exons of multiexonic lncRNA loci
por: Haerty, Wilfried, et al.
Publicado: (2015)

Metabolome and transcriptome analyses identify the characteristics and expression of related saponins of the three genealogical plants of bead ginseng
por: Ye, Yihan, et al.
Publicado: (2023)

Intragenomic polymorphisms among high-copy loci: a genus-wide study of nuclear ribosomal DNA in Asclepias (Apocynaceae)
por: Weitemier, Kevin, et al.
Publicado: (2015)

Genomic analysis of P elements in natural populations of Drosophila melanogaster
por: Bergman, Casey M., et al.
Publicado: (2017)

Low expression or hypermethylation of PLK2 might predict favorable prognosis for patients with glioblastoma multiforme
por: Xia, Xiangping, et al.
Publicado: (2019)

MIRU-profiler: a rapid tool for determination of 24-loci MIRU-VNTR profiles from assembled genomes of Mycobacterium tuberculosis
por: Rajwani, Rahim, et al.
Publicado: (2018)

Temporal and spatial differences in the vaginal microbiome of Chinese healthy women
por: Du, Limin, et al.
Publicado: (2023)

Genetic diversity of ‘Very Important Pharmacogenes’ in two South-Asian populations
por: Bharti, Neeraj, et al.
Publicado: (2021)

MicroRNAs tend to synergistically control expression of genes encoding extensively-expressed proteins in humans
por: Chen, Xue, et al.
Publicado: (2017)

Multivariate GWAS analysis reveals loci associated with liver functions in continental African populations
por: Soremekun, Chisom, et al.
Publicado: (2023)

High mutations in fatty acid metabolism contribute to a better prognosis of small‐cell lung cancer patients treated with chemotherapy
por: Lyu, Qiong, et al.
Publicado: (2021)

US Population Data for 94 Identity-Informative SNP Loci
por: Kiesler, Kevin M., et al.
Publicado: (2023)

GroopM: an automated tool for the recovery of population genomes from related metagenomes
por: Imelfort, Michael, et al.
Publicado: (2014)

Diverse and variable virus communities in wild plant populations revealed by metagenomic tools
por: Susi, Hanna, et al.
Publicado: (2019)

Cannot write session to /tmp/vufind_sessions/sess_07nr4k1r2vk9r78mplv7i7l594