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Biodiversity data integration—the significance of data resolution and domain

Recent years have seen an explosion in the availability of biodiversity data describing the distribution, function, and evolutionary history of life on earth. Integrating these heterogeneous data remains a challenge due to large variations in observational scales, collection purposes, and terminolog...

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Autores principales: König, Christian, Weigelt, Patrick, Schrader, Julian, Taylor, Amanda, Kattge, Jens, Kreft, Holger
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6445469/
https://www.ncbi.nlm.nih.gov/pubmed/30883539
http://dx.doi.org/10.1371/journal.pbio.3000183
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author König, Christian
Weigelt, Patrick
Schrader, Julian
Taylor, Amanda
Kattge, Jens
Kreft, Holger
author_facet König, Christian
Weigelt, Patrick
Schrader, Julian
Taylor, Amanda
Kattge, Jens
Kreft, Holger
author_sort König, Christian
collection PubMed
description Recent years have seen an explosion in the availability of biodiversity data describing the distribution, function, and evolutionary history of life on earth. Integrating these heterogeneous data remains a challenge due to large variations in observational scales, collection purposes, and terminologies. Here, we conceptualize widely used biodiversity data types according to their domain (what aspect of biodiversity is described?) and informational resolution (how specific is the description?). Applying this framework to major data providers in biodiversity research reveals a strong focus on the disaggregated end of the data spectrum, whereas aggregated data types remain largely underutilized. We discuss the implications of this imbalance for the scope and representativeness of current macroecological research and highlight the synergies arising from a tighter integration of biodiversity data across domains and resolutions. We lay out effective strategies for data collection, mobilization, imputation, and sharing and summarize existing frameworks for scalable and integrative biodiversity research. Finally, we use two case studies to demonstrate how the explicit consideration of data domain and resolution helps to identify biases and gaps in global data sets and achieve unprecedented taxonomic and geographical data coverage in macroecological analyses.
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spelling pubmed-64454692019-04-17 Biodiversity data integration—the significance of data resolution and domain König, Christian Weigelt, Patrick Schrader, Julian Taylor, Amanda Kattge, Jens Kreft, Holger PLoS Biol Essay Recent years have seen an explosion in the availability of biodiversity data describing the distribution, function, and evolutionary history of life on earth. Integrating these heterogeneous data remains a challenge due to large variations in observational scales, collection purposes, and terminologies. Here, we conceptualize widely used biodiversity data types according to their domain (what aspect of biodiversity is described?) and informational resolution (how specific is the description?). Applying this framework to major data providers in biodiversity research reveals a strong focus on the disaggregated end of the data spectrum, whereas aggregated data types remain largely underutilized. We discuss the implications of this imbalance for the scope and representativeness of current macroecological research and highlight the synergies arising from a tighter integration of biodiversity data across domains and resolutions. We lay out effective strategies for data collection, mobilization, imputation, and sharing and summarize existing frameworks for scalable and integrative biodiversity research. Finally, we use two case studies to demonstrate how the explicit consideration of data domain and resolution helps to identify biases and gaps in global data sets and achieve unprecedented taxonomic and geographical data coverage in macroecological analyses. Public Library of Science 2019-03-18 /pmc/articles/PMC6445469/ /pubmed/30883539 http://dx.doi.org/10.1371/journal.pbio.3000183 Text en © 2019 König et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Essay
König, Christian
Weigelt, Patrick
Schrader, Julian
Taylor, Amanda
Kattge, Jens
Kreft, Holger
Biodiversity data integration—the significance of data resolution and domain
title Biodiversity data integration—the significance of data resolution and domain
title_full Biodiversity data integration—the significance of data resolution and domain
title_fullStr Biodiversity data integration—the significance of data resolution and domain
title_full_unstemmed Biodiversity data integration—the significance of data resolution and domain
title_short Biodiversity data integration—the significance of data resolution and domain
title_sort biodiversity data integration—the significance of data resolution and domain
topic Essay
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6445469/
https://www.ncbi.nlm.nih.gov/pubmed/30883539
http://dx.doi.org/10.1371/journal.pbio.3000183
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