Cargando…
Identification of Target Genes at Juvenile Idiopathic Arthritis GWAS Loci in Human Neutrophils
Juvenile idiopathic arthritis (JIA) is the most common chronic rheumatic disease among children which could cause severe disability. Genomic studies have discovered substantial number of risk loci for JIA, however, the mechanism of how these loci affect JIA development is not fully understood. Neutr...
Autores principales: | , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6445851/ https://www.ncbi.nlm.nih.gov/pubmed/30972099 http://dx.doi.org/10.3389/fgene.2019.00181 |
_version_ | 1783408254683971584 |
---|---|
author | Li, Junyi Yuan, Xiucheng March, Michael E. Yao, Xueming Sun, Yan Chang, Xiao Hakonarson, Hakon Xia, Qianghua Meng, Xinyi Li, Jin |
author_facet | Li, Junyi Yuan, Xiucheng March, Michael E. Yao, Xueming Sun, Yan Chang, Xiao Hakonarson, Hakon Xia, Qianghua Meng, Xinyi Li, Jin |
author_sort | Li, Junyi |
collection | PubMed |
description | Juvenile idiopathic arthritis (JIA) is the most common chronic rheumatic disease among children which could cause severe disability. Genomic studies have discovered substantial number of risk loci for JIA, however, the mechanism of how these loci affect JIA development is not fully understood. Neutrophil is an important cell type involved in autoimmune diseases. To better understand the biological function of genetic loci in neutrophils during JIA development, we took an integrated multi-omics approach to identify target genes at JIA risk loci in neutrophils and constructed a protein-protein interaction network via a machine learning approach. We identified genes likely to be JIA risk loci targeted genes in neutrophils which could contribute to JIA development. |
format | Online Article Text |
id | pubmed-6445851 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-64458512019-04-10 Identification of Target Genes at Juvenile Idiopathic Arthritis GWAS Loci in Human Neutrophils Li, Junyi Yuan, Xiucheng March, Michael E. Yao, Xueming Sun, Yan Chang, Xiao Hakonarson, Hakon Xia, Qianghua Meng, Xinyi Li, Jin Front Genet Genetics Juvenile idiopathic arthritis (JIA) is the most common chronic rheumatic disease among children which could cause severe disability. Genomic studies have discovered substantial number of risk loci for JIA, however, the mechanism of how these loci affect JIA development is not fully understood. Neutrophil is an important cell type involved in autoimmune diseases. To better understand the biological function of genetic loci in neutrophils during JIA development, we took an integrated multi-omics approach to identify target genes at JIA risk loci in neutrophils and constructed a protein-protein interaction network via a machine learning approach. We identified genes likely to be JIA risk loci targeted genes in neutrophils which could contribute to JIA development. Frontiers Media S.A. 2019-03-27 /pmc/articles/PMC6445851/ /pubmed/30972099 http://dx.doi.org/10.3389/fgene.2019.00181 Text en Copyright © 2019 Li, Yuan, March, Yao, Sun, Chang, Hakonarson, Xia, Meng and Li. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Genetics Li, Junyi Yuan, Xiucheng March, Michael E. Yao, Xueming Sun, Yan Chang, Xiao Hakonarson, Hakon Xia, Qianghua Meng, Xinyi Li, Jin Identification of Target Genes at Juvenile Idiopathic Arthritis GWAS Loci in Human Neutrophils |
title | Identification of Target Genes at Juvenile Idiopathic Arthritis GWAS Loci in Human Neutrophils |
title_full | Identification of Target Genes at Juvenile Idiopathic Arthritis GWAS Loci in Human Neutrophils |
title_fullStr | Identification of Target Genes at Juvenile Idiopathic Arthritis GWAS Loci in Human Neutrophils |
title_full_unstemmed | Identification of Target Genes at Juvenile Idiopathic Arthritis GWAS Loci in Human Neutrophils |
title_short | Identification of Target Genes at Juvenile Idiopathic Arthritis GWAS Loci in Human Neutrophils |
title_sort | identification of target genes at juvenile idiopathic arthritis gwas loci in human neutrophils |
topic | Genetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6445851/ https://www.ncbi.nlm.nih.gov/pubmed/30972099 http://dx.doi.org/10.3389/fgene.2019.00181 |
work_keys_str_mv | AT lijunyi identificationoftargetgenesatjuvenileidiopathicarthritisgwaslociinhumanneutrophils AT yuanxiucheng identificationoftargetgenesatjuvenileidiopathicarthritisgwaslociinhumanneutrophils AT marchmichaele identificationoftargetgenesatjuvenileidiopathicarthritisgwaslociinhumanneutrophils AT yaoxueming identificationoftargetgenesatjuvenileidiopathicarthritisgwaslociinhumanneutrophils AT sunyan identificationoftargetgenesatjuvenileidiopathicarthritisgwaslociinhumanneutrophils AT changxiao identificationoftargetgenesatjuvenileidiopathicarthritisgwaslociinhumanneutrophils AT hakonarsonhakon identificationoftargetgenesatjuvenileidiopathicarthritisgwaslociinhumanneutrophils AT xiaqianghua identificationoftargetgenesatjuvenileidiopathicarthritisgwaslociinhumanneutrophils AT mengxinyi identificationoftargetgenesatjuvenileidiopathicarthritisgwaslociinhumanneutrophils AT lijin identificationoftargetgenesatjuvenileidiopathicarthritisgwaslociinhumanneutrophils |