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In silico Characterization of Human Prion-Like Proteins: Beyond Neurological Diseases

Prion-like behavior has been in the spotlight since it was first associated with the onset of mammalian neurodegenerative diseases. However, a growing body of evidence suggests that this mechanism could be behind the regulation of processes such as transcription and translation in multiple species....

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Autores principales: Iglesias, Valentin, Paladin, Lisanna, Juan-Blanco, Teresa, Pallarès, Irantzu, Aloy, Patrick, Tosatto, Silvio C. E., Ventura, Salvador
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6445884/
https://www.ncbi.nlm.nih.gov/pubmed/30971948
http://dx.doi.org/10.3389/fphys.2019.00314
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author Iglesias, Valentin
Paladin, Lisanna
Juan-Blanco, Teresa
Pallarès, Irantzu
Aloy, Patrick
Tosatto, Silvio C. E.
Ventura, Salvador
author_facet Iglesias, Valentin
Paladin, Lisanna
Juan-Blanco, Teresa
Pallarès, Irantzu
Aloy, Patrick
Tosatto, Silvio C. E.
Ventura, Salvador
author_sort Iglesias, Valentin
collection PubMed
description Prion-like behavior has been in the spotlight since it was first associated with the onset of mammalian neurodegenerative diseases. However, a growing body of evidence suggests that this mechanism could be behind the regulation of processes such as transcription and translation in multiple species. Here, we perform a stringent computational survey to identify prion-like proteins in the human proteome. We detected 242 candidate polypeptides and computationally assessed their function, protein–protein interaction networks, tissular expression, and their link to disease. Human prion-like proteins constitute a subset of modular polypeptides broadly expressed across different cell types and tissues, significantly associated with disease, embedded in highly connected interaction networks, and involved in the flow of genetic information in the cell. Our analysis suggests that these proteins might play a relevant role not only in neurological disorders, but also in different types of cancer and viral infections.
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spelling pubmed-64458842019-04-10 In silico Characterization of Human Prion-Like Proteins: Beyond Neurological Diseases Iglesias, Valentin Paladin, Lisanna Juan-Blanco, Teresa Pallarès, Irantzu Aloy, Patrick Tosatto, Silvio C. E. Ventura, Salvador Front Physiol Physiology Prion-like behavior has been in the spotlight since it was first associated with the onset of mammalian neurodegenerative diseases. However, a growing body of evidence suggests that this mechanism could be behind the regulation of processes such as transcription and translation in multiple species. Here, we perform a stringent computational survey to identify prion-like proteins in the human proteome. We detected 242 candidate polypeptides and computationally assessed their function, protein–protein interaction networks, tissular expression, and their link to disease. Human prion-like proteins constitute a subset of modular polypeptides broadly expressed across different cell types and tissues, significantly associated with disease, embedded in highly connected interaction networks, and involved in the flow of genetic information in the cell. Our analysis suggests that these proteins might play a relevant role not only in neurological disorders, but also in different types of cancer and viral infections. Frontiers Media S.A. 2019-03-27 /pmc/articles/PMC6445884/ /pubmed/30971948 http://dx.doi.org/10.3389/fphys.2019.00314 Text en Copyright © 2019 Iglesias, Paladin, Juan-Blanco, Pallarès, Aloy, Tosatto and Ventura. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Physiology
Iglesias, Valentin
Paladin, Lisanna
Juan-Blanco, Teresa
Pallarès, Irantzu
Aloy, Patrick
Tosatto, Silvio C. E.
Ventura, Salvador
In silico Characterization of Human Prion-Like Proteins: Beyond Neurological Diseases
title In silico Characterization of Human Prion-Like Proteins: Beyond Neurological Diseases
title_full In silico Characterization of Human Prion-Like Proteins: Beyond Neurological Diseases
title_fullStr In silico Characterization of Human Prion-Like Proteins: Beyond Neurological Diseases
title_full_unstemmed In silico Characterization of Human Prion-Like Proteins: Beyond Neurological Diseases
title_short In silico Characterization of Human Prion-Like Proteins: Beyond Neurological Diseases
title_sort in silico characterization of human prion-like proteins: beyond neurological diseases
topic Physiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6445884/
https://www.ncbi.nlm.nih.gov/pubmed/30971948
http://dx.doi.org/10.3389/fphys.2019.00314
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