Cargando…

Feasibility and utility of a panel testing for 114 cancer‐associated genes in a clinical setting: A hospital‐based study

Next‐generation sequencing (NGS) of tumor tissue (ie, clinical sequencing) can guide clinical management by providing information about actionable gene aberrations that have diagnostic and therapeutic significance. Here, we undertook a hospital‐based prospective study (TOP‐GEAR project, 2nd stage) t...

Descripción completa

Detalles Bibliográficos
Autores principales: Sunami, Kuniko, Ichikawa, Hitoshi, Kubo, Takashi, Kato, Mamoru, Fujiwara, Yutaka, Shimomura, Akihiko, Koyama, Takafumi, Kakishima, Hiroki, Kitami, Mayuko, Matsushita, Hiromichi, Furukawa, Eisaku, Narushima, Daichi, Nagai, Momoko, Taniguchi, Hirokazu, Motoi, Noriko, Sekine, Shigeki, Maeshima, Akiko, Mori, Taisuke, Watanabe, Reiko, Yoshida, Masayuki, Yoshida, Akihiko, Yoshida, Hiroshi, Satomi, Kaishi, Sukeda, Aoi, Hashimoto, Taiki, Shimizu, Toshio, Iwasa, Satoru, Yonemori, Kan, Kato, Ken, Morizane, Chigusa, Ogawa, Chitose, Tanabe, Noriko, Sugano, Kokichi, Hiraoka, Nobuyoshi, Tamura, Kenji, Yoshida, Teruhiko, Fujiwara, Yasuhiro, Ochiai, Atsushi, Yamamoto, Noboru, Kohno, Takashi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6447843/
https://www.ncbi.nlm.nih.gov/pubmed/30742731
http://dx.doi.org/10.1111/cas.13969
_version_ 1783408581331124224
author Sunami, Kuniko
Ichikawa, Hitoshi
Kubo, Takashi
Kato, Mamoru
Fujiwara, Yutaka
Shimomura, Akihiko
Koyama, Takafumi
Kakishima, Hiroki
Kitami, Mayuko
Matsushita, Hiromichi
Furukawa, Eisaku
Narushima, Daichi
Nagai, Momoko
Taniguchi, Hirokazu
Motoi, Noriko
Sekine, Shigeki
Maeshima, Akiko
Mori, Taisuke
Watanabe, Reiko
Yoshida, Masayuki
Yoshida, Akihiko
Yoshida, Hiroshi
Satomi, Kaishi
Sukeda, Aoi
Hashimoto, Taiki
Shimizu, Toshio
Iwasa, Satoru
Yonemori, Kan
Kato, Ken
Morizane, Chigusa
Ogawa, Chitose
Tanabe, Noriko
Sugano, Kokichi
Hiraoka, Nobuyoshi
Tamura, Kenji
Yoshida, Teruhiko
Fujiwara, Yasuhiro
Ochiai, Atsushi
Yamamoto, Noboru
Kohno, Takashi
author_facet Sunami, Kuniko
Ichikawa, Hitoshi
Kubo, Takashi
Kato, Mamoru
Fujiwara, Yutaka
Shimomura, Akihiko
Koyama, Takafumi
Kakishima, Hiroki
Kitami, Mayuko
Matsushita, Hiromichi
Furukawa, Eisaku
Narushima, Daichi
Nagai, Momoko
Taniguchi, Hirokazu
Motoi, Noriko
Sekine, Shigeki
Maeshima, Akiko
Mori, Taisuke
Watanabe, Reiko
Yoshida, Masayuki
Yoshida, Akihiko
Yoshida, Hiroshi
Satomi, Kaishi
Sukeda, Aoi
Hashimoto, Taiki
Shimizu, Toshio
Iwasa, Satoru
Yonemori, Kan
Kato, Ken
Morizane, Chigusa
Ogawa, Chitose
Tanabe, Noriko
Sugano, Kokichi
Hiraoka, Nobuyoshi
Tamura, Kenji
Yoshida, Teruhiko
Fujiwara, Yasuhiro
Ochiai, Atsushi
Yamamoto, Noboru
Kohno, Takashi
author_sort Sunami, Kuniko
collection PubMed
description Next‐generation sequencing (NGS) of tumor tissue (ie, clinical sequencing) can guide clinical management by providing information about actionable gene aberrations that have diagnostic and therapeutic significance. Here, we undertook a hospital‐based prospective study (TOP‐GEAR project, 2nd stage) to investigate the feasibility and utility of NGS‐based analysis of 114 cancer‐associated genes (the NCC Oncopanel test). We examined 230 cases (comprising more than 30 tumor types) of advanced solid tumors, all of which were matched with nontumor samples. Gene profiling data were obtained for 187 cases (81.3%), 111 (59.4%) of which harbored actionable gene aberrations according to the Clinical Practice Guidelines for Next Generation Sequencing in Cancer Diagnosis and Treatment (Edition 1.0) issued by 3 major Japanese cancer‐related societies. Twenty‐five (13.3%) cases have since received molecular‐targeted therapy according to their gene aberrations. These results indicate the utility of tumor‐profiling multiplex gene panel testing in a clinical setting in Japan. This study is registered with UMIN Clinical Trials Registry (UMIN 000011141).
format Online
Article
Text
id pubmed-6447843
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher John Wiley and Sons Inc.
record_format MEDLINE/PubMed
spelling pubmed-64478432019-04-15 Feasibility and utility of a panel testing for 114 cancer‐associated genes in a clinical setting: A hospital‐based study Sunami, Kuniko Ichikawa, Hitoshi Kubo, Takashi Kato, Mamoru Fujiwara, Yutaka Shimomura, Akihiko Koyama, Takafumi Kakishima, Hiroki Kitami, Mayuko Matsushita, Hiromichi Furukawa, Eisaku Narushima, Daichi Nagai, Momoko Taniguchi, Hirokazu Motoi, Noriko Sekine, Shigeki Maeshima, Akiko Mori, Taisuke Watanabe, Reiko Yoshida, Masayuki Yoshida, Akihiko Yoshida, Hiroshi Satomi, Kaishi Sukeda, Aoi Hashimoto, Taiki Shimizu, Toshio Iwasa, Satoru Yonemori, Kan Kato, Ken Morizane, Chigusa Ogawa, Chitose Tanabe, Noriko Sugano, Kokichi Hiraoka, Nobuyoshi Tamura, Kenji Yoshida, Teruhiko Fujiwara, Yasuhiro Ochiai, Atsushi Yamamoto, Noboru Kohno, Takashi Cancer Sci Original Articles Next‐generation sequencing (NGS) of tumor tissue (ie, clinical sequencing) can guide clinical management by providing information about actionable gene aberrations that have diagnostic and therapeutic significance. Here, we undertook a hospital‐based prospective study (TOP‐GEAR project, 2nd stage) to investigate the feasibility and utility of NGS‐based analysis of 114 cancer‐associated genes (the NCC Oncopanel test). We examined 230 cases (comprising more than 30 tumor types) of advanced solid tumors, all of which were matched with nontumor samples. Gene profiling data were obtained for 187 cases (81.3%), 111 (59.4%) of which harbored actionable gene aberrations according to the Clinical Practice Guidelines for Next Generation Sequencing in Cancer Diagnosis and Treatment (Edition 1.0) issued by 3 major Japanese cancer‐related societies. Twenty‐five (13.3%) cases have since received molecular‐targeted therapy according to their gene aberrations. These results indicate the utility of tumor‐profiling multiplex gene panel testing in a clinical setting in Japan. This study is registered with UMIN Clinical Trials Registry (UMIN 000011141). John Wiley and Sons Inc. 2019-04-02 2019-04 /pmc/articles/PMC6447843/ /pubmed/30742731 http://dx.doi.org/10.1111/cas.13969 Text en © 2019 The Authors. Cancer Science published by John Wiley & Sons Australia, Ltd on behalf of Japanese Cancer Association. This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.
spellingShingle Original Articles
Sunami, Kuniko
Ichikawa, Hitoshi
Kubo, Takashi
Kato, Mamoru
Fujiwara, Yutaka
Shimomura, Akihiko
Koyama, Takafumi
Kakishima, Hiroki
Kitami, Mayuko
Matsushita, Hiromichi
Furukawa, Eisaku
Narushima, Daichi
Nagai, Momoko
Taniguchi, Hirokazu
Motoi, Noriko
Sekine, Shigeki
Maeshima, Akiko
Mori, Taisuke
Watanabe, Reiko
Yoshida, Masayuki
Yoshida, Akihiko
Yoshida, Hiroshi
Satomi, Kaishi
Sukeda, Aoi
Hashimoto, Taiki
Shimizu, Toshio
Iwasa, Satoru
Yonemori, Kan
Kato, Ken
Morizane, Chigusa
Ogawa, Chitose
Tanabe, Noriko
Sugano, Kokichi
Hiraoka, Nobuyoshi
Tamura, Kenji
Yoshida, Teruhiko
Fujiwara, Yasuhiro
Ochiai, Atsushi
Yamamoto, Noboru
Kohno, Takashi
Feasibility and utility of a panel testing for 114 cancer‐associated genes in a clinical setting: A hospital‐based study
title Feasibility and utility of a panel testing for 114 cancer‐associated genes in a clinical setting: A hospital‐based study
title_full Feasibility and utility of a panel testing for 114 cancer‐associated genes in a clinical setting: A hospital‐based study
title_fullStr Feasibility and utility of a panel testing for 114 cancer‐associated genes in a clinical setting: A hospital‐based study
title_full_unstemmed Feasibility and utility of a panel testing for 114 cancer‐associated genes in a clinical setting: A hospital‐based study
title_short Feasibility and utility of a panel testing for 114 cancer‐associated genes in a clinical setting: A hospital‐based study
title_sort feasibility and utility of a panel testing for 114 cancer‐associated genes in a clinical setting: a hospital‐based study
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6447843/
https://www.ncbi.nlm.nih.gov/pubmed/30742731
http://dx.doi.org/10.1111/cas.13969
work_keys_str_mv AT sunamikuniko feasibilityandutilityofapaneltestingfor114cancerassociatedgenesinaclinicalsettingahospitalbasedstudy
AT ichikawahitoshi feasibilityandutilityofapaneltestingfor114cancerassociatedgenesinaclinicalsettingahospitalbasedstudy
AT kubotakashi feasibilityandutilityofapaneltestingfor114cancerassociatedgenesinaclinicalsettingahospitalbasedstudy
AT katomamoru feasibilityandutilityofapaneltestingfor114cancerassociatedgenesinaclinicalsettingahospitalbasedstudy
AT fujiwarayutaka feasibilityandutilityofapaneltestingfor114cancerassociatedgenesinaclinicalsettingahospitalbasedstudy
AT shimomuraakihiko feasibilityandutilityofapaneltestingfor114cancerassociatedgenesinaclinicalsettingahospitalbasedstudy
AT koyamatakafumi feasibilityandutilityofapaneltestingfor114cancerassociatedgenesinaclinicalsettingahospitalbasedstudy
AT kakishimahiroki feasibilityandutilityofapaneltestingfor114cancerassociatedgenesinaclinicalsettingahospitalbasedstudy
AT kitamimayuko feasibilityandutilityofapaneltestingfor114cancerassociatedgenesinaclinicalsettingahospitalbasedstudy
AT matsushitahiromichi feasibilityandutilityofapaneltestingfor114cancerassociatedgenesinaclinicalsettingahospitalbasedstudy
AT furukawaeisaku feasibilityandutilityofapaneltestingfor114cancerassociatedgenesinaclinicalsettingahospitalbasedstudy
AT narushimadaichi feasibilityandutilityofapaneltestingfor114cancerassociatedgenesinaclinicalsettingahospitalbasedstudy
AT nagaimomoko feasibilityandutilityofapaneltestingfor114cancerassociatedgenesinaclinicalsettingahospitalbasedstudy
AT taniguchihirokazu feasibilityandutilityofapaneltestingfor114cancerassociatedgenesinaclinicalsettingahospitalbasedstudy
AT motoinoriko feasibilityandutilityofapaneltestingfor114cancerassociatedgenesinaclinicalsettingahospitalbasedstudy
AT sekineshigeki feasibilityandutilityofapaneltestingfor114cancerassociatedgenesinaclinicalsettingahospitalbasedstudy
AT maeshimaakiko feasibilityandutilityofapaneltestingfor114cancerassociatedgenesinaclinicalsettingahospitalbasedstudy
AT moritaisuke feasibilityandutilityofapaneltestingfor114cancerassociatedgenesinaclinicalsettingahospitalbasedstudy
AT watanabereiko feasibilityandutilityofapaneltestingfor114cancerassociatedgenesinaclinicalsettingahospitalbasedstudy
AT yoshidamasayuki feasibilityandutilityofapaneltestingfor114cancerassociatedgenesinaclinicalsettingahospitalbasedstudy
AT yoshidaakihiko feasibilityandutilityofapaneltestingfor114cancerassociatedgenesinaclinicalsettingahospitalbasedstudy
AT yoshidahiroshi feasibilityandutilityofapaneltestingfor114cancerassociatedgenesinaclinicalsettingahospitalbasedstudy
AT satomikaishi feasibilityandutilityofapaneltestingfor114cancerassociatedgenesinaclinicalsettingahospitalbasedstudy
AT sukedaaoi feasibilityandutilityofapaneltestingfor114cancerassociatedgenesinaclinicalsettingahospitalbasedstudy
AT hashimototaiki feasibilityandutilityofapaneltestingfor114cancerassociatedgenesinaclinicalsettingahospitalbasedstudy
AT shimizutoshio feasibilityandutilityofapaneltestingfor114cancerassociatedgenesinaclinicalsettingahospitalbasedstudy
AT iwasasatoru feasibilityandutilityofapaneltestingfor114cancerassociatedgenesinaclinicalsettingahospitalbasedstudy
AT yonemorikan feasibilityandutilityofapaneltestingfor114cancerassociatedgenesinaclinicalsettingahospitalbasedstudy
AT katoken feasibilityandutilityofapaneltestingfor114cancerassociatedgenesinaclinicalsettingahospitalbasedstudy
AT morizanechigusa feasibilityandutilityofapaneltestingfor114cancerassociatedgenesinaclinicalsettingahospitalbasedstudy
AT ogawachitose feasibilityandutilityofapaneltestingfor114cancerassociatedgenesinaclinicalsettingahospitalbasedstudy
AT tanabenoriko feasibilityandutilityofapaneltestingfor114cancerassociatedgenesinaclinicalsettingahospitalbasedstudy
AT suganokokichi feasibilityandutilityofapaneltestingfor114cancerassociatedgenesinaclinicalsettingahospitalbasedstudy
AT hiraokanobuyoshi feasibilityandutilityofapaneltestingfor114cancerassociatedgenesinaclinicalsettingahospitalbasedstudy
AT tamurakenji feasibilityandutilityofapaneltestingfor114cancerassociatedgenesinaclinicalsettingahospitalbasedstudy
AT yoshidateruhiko feasibilityandutilityofapaneltestingfor114cancerassociatedgenesinaclinicalsettingahospitalbasedstudy
AT fujiwarayasuhiro feasibilityandutilityofapaneltestingfor114cancerassociatedgenesinaclinicalsettingahospitalbasedstudy
AT ochiaiatsushi feasibilityandutilityofapaneltestingfor114cancerassociatedgenesinaclinicalsettingahospitalbasedstudy
AT yamamotonoboru feasibilityandutilityofapaneltestingfor114cancerassociatedgenesinaclinicalsettingahospitalbasedstudy
AT kohnotakashi feasibilityandutilityofapaneltestingfor114cancerassociatedgenesinaclinicalsettingahospitalbasedstudy