Cargando…
Protein-Protein Interaction Analysis of Common Top Genes in Obsessive-Compulsive Disorder (OCD) and Schizophrenia: Towards New Drug Approach Obsessive-Compulsive disorder (OCD) and Schizophrenia Comorbidity Gene Analysis
Comorbidty is common among psychiatric disorders including obsessive-compulsive disorder and schizophrenia with a high rate. Many studies suggested that the disorders may have same etiological bases. In this regard, shared pathways of glutamate, dopaminergic, and serotonin are the known ones. Here,...
Autores principales: | , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Shaheed Beheshti University of Medical Sciences
2018
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6447879/ https://www.ncbi.nlm.nih.gov/pubmed/31086558 |
_version_ | 1783408589471219712 |
---|---|
author | Mahboubi, Mohammad Zamanian Azodi, Mona Rezaei Tavirani, Mostafa Mansouri, Vahid Ali Ahmadi, Nayeb Hamdieh, Mostafa Rezaei Tavirani, Majid Naghavi Gargari, Bahar |
author_facet | Mahboubi, Mohammad Zamanian Azodi, Mona Rezaei Tavirani, Mostafa Mansouri, Vahid Ali Ahmadi, Nayeb Hamdieh, Mostafa Rezaei Tavirani, Majid Naghavi Gargari, Bahar |
author_sort | Mahboubi, Mohammad |
collection | PubMed |
description | Comorbidty is common among psychiatric disorders including obsessive-compulsive disorder and schizophrenia with a high rate. Many studies suggested that the disorders may have same etiological bases. In this regard, shared pathways of glutamate, dopaminergic, and serotonin are the known ones. Here, the common significant genes are examined to understand the possible molecular origin of the disorders in terms of sequence and functional features. Exploring the underling mechanisms of OCD and schizophrenia is important to achieve a better treatment options. Methods of Cytoscape software following R statistical software were applied for this purpose. Needleman-Wunsch global alignment algorithm was used to determine pair-wise similarities followed by clustering methods, AGNES and PAM in R statistical programming software. The results indicate that SLC1A1, DRD2, DRD4, BDNF, ESR1, CDH2, GRIN2B, TNFa, GABBR1, and OLIG2 are significantly common for the two disorders and PPI network analysis showed the important key genes in the interaction profile. ESR1 (estrogen receptor α) as a key hub-bottleneck gene regulates many underling mechanisms of the brain. Application of global alignments indicates some of the genes with sequence similarities also elucidate similar biological terms. |
format | Online Article Text |
id | pubmed-6447879 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Shaheed Beheshti University of Medical Sciences |
record_format | MEDLINE/PubMed |
spelling | pubmed-64478792019-05-13 Protein-Protein Interaction Analysis of Common Top Genes in Obsessive-Compulsive Disorder (OCD) and Schizophrenia: Towards New Drug Approach Obsessive-Compulsive disorder (OCD) and Schizophrenia Comorbidity Gene Analysis Mahboubi, Mohammad Zamanian Azodi, Mona Rezaei Tavirani, Mostafa Mansouri, Vahid Ali Ahmadi, Nayeb Hamdieh, Mostafa Rezaei Tavirani, Majid Naghavi Gargari, Bahar Iran J Pharm Res Original Article Comorbidty is common among psychiatric disorders including obsessive-compulsive disorder and schizophrenia with a high rate. Many studies suggested that the disorders may have same etiological bases. In this regard, shared pathways of glutamate, dopaminergic, and serotonin are the known ones. Here, the common significant genes are examined to understand the possible molecular origin of the disorders in terms of sequence and functional features. Exploring the underling mechanisms of OCD and schizophrenia is important to achieve a better treatment options. Methods of Cytoscape software following R statistical software were applied for this purpose. Needleman-Wunsch global alignment algorithm was used to determine pair-wise similarities followed by clustering methods, AGNES and PAM in R statistical programming software. The results indicate that SLC1A1, DRD2, DRD4, BDNF, ESR1, CDH2, GRIN2B, TNFa, GABBR1, and OLIG2 are significantly common for the two disorders and PPI network analysis showed the important key genes in the interaction profile. ESR1 (estrogen receptor α) as a key hub-bottleneck gene regulates many underling mechanisms of the brain. Application of global alignments indicates some of the genes with sequence similarities also elucidate similar biological terms. Shaheed Beheshti University of Medical Sciences 2018 /pmc/articles/PMC6447879/ /pubmed/31086558 Text en This is an Open Access article distributed under the terms of the Creative Commons Attribution License, (http://creativecommons.org/licenses/by/3.0/) which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article Mahboubi, Mohammad Zamanian Azodi, Mona Rezaei Tavirani, Mostafa Mansouri, Vahid Ali Ahmadi, Nayeb Hamdieh, Mostafa Rezaei Tavirani, Majid Naghavi Gargari, Bahar Protein-Protein Interaction Analysis of Common Top Genes in Obsessive-Compulsive Disorder (OCD) and Schizophrenia: Towards New Drug Approach Obsessive-Compulsive disorder (OCD) and Schizophrenia Comorbidity Gene Analysis |
title | Protein-Protein Interaction Analysis of Common Top Genes in Obsessive-Compulsive Disorder (OCD) and Schizophrenia: Towards New Drug Approach Obsessive-Compulsive disorder (OCD) and Schizophrenia Comorbidity Gene Analysis |
title_full | Protein-Protein Interaction Analysis of Common Top Genes in Obsessive-Compulsive Disorder (OCD) and Schizophrenia: Towards New Drug Approach Obsessive-Compulsive disorder (OCD) and Schizophrenia Comorbidity Gene Analysis |
title_fullStr | Protein-Protein Interaction Analysis of Common Top Genes in Obsessive-Compulsive Disorder (OCD) and Schizophrenia: Towards New Drug Approach Obsessive-Compulsive disorder (OCD) and Schizophrenia Comorbidity Gene Analysis |
title_full_unstemmed | Protein-Protein Interaction Analysis of Common Top Genes in Obsessive-Compulsive Disorder (OCD) and Schizophrenia: Towards New Drug Approach Obsessive-Compulsive disorder (OCD) and Schizophrenia Comorbidity Gene Analysis |
title_short | Protein-Protein Interaction Analysis of Common Top Genes in Obsessive-Compulsive Disorder (OCD) and Schizophrenia: Towards New Drug Approach Obsessive-Compulsive disorder (OCD) and Schizophrenia Comorbidity Gene Analysis |
title_sort | protein-protein interaction analysis of common top genes in obsessive-compulsive disorder (ocd) and schizophrenia: towards new drug approach obsessive-compulsive disorder (ocd) and schizophrenia comorbidity gene analysis |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6447879/ https://www.ncbi.nlm.nih.gov/pubmed/31086558 |
work_keys_str_mv | AT mahboubimohammad proteinproteininteractionanalysisofcommontopgenesinobsessivecompulsivedisorderocdandschizophreniatowardsnewdrugapproachobsessivecompulsivedisorderocdandschizophreniacomorbiditygeneanalysis AT zamanianazodimona proteinproteininteractionanalysisofcommontopgenesinobsessivecompulsivedisorderocdandschizophreniatowardsnewdrugapproachobsessivecompulsivedisorderocdandschizophreniacomorbiditygeneanalysis AT rezaeitaviranimostafa proteinproteininteractionanalysisofcommontopgenesinobsessivecompulsivedisorderocdandschizophreniatowardsnewdrugapproachobsessivecompulsivedisorderocdandschizophreniacomorbiditygeneanalysis AT mansourivahid proteinproteininteractionanalysisofcommontopgenesinobsessivecompulsivedisorderocdandschizophreniatowardsnewdrugapproachobsessivecompulsivedisorderocdandschizophreniacomorbiditygeneanalysis AT aliahmadinayeb proteinproteininteractionanalysisofcommontopgenesinobsessivecompulsivedisorderocdandschizophreniatowardsnewdrugapproachobsessivecompulsivedisorderocdandschizophreniacomorbiditygeneanalysis AT hamdiehmostafa proteinproteininteractionanalysisofcommontopgenesinobsessivecompulsivedisorderocdandschizophreniatowardsnewdrugapproachobsessivecompulsivedisorderocdandschizophreniacomorbiditygeneanalysis AT rezaeitaviranimajid proteinproteininteractionanalysisofcommontopgenesinobsessivecompulsivedisorderocdandschizophreniatowardsnewdrugapproachobsessivecompulsivedisorderocdandschizophreniacomorbiditygeneanalysis AT naghavigargaribahar proteinproteininteractionanalysisofcommontopgenesinobsessivecompulsivedisorderocdandschizophreniatowardsnewdrugapproachobsessivecompulsivedisorderocdandschizophreniacomorbiditygeneanalysis |