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LncRNA MIR4435-2HG predicts poor prognosis in patients with colorectal cancer
BACKGROUND: LncRNA MIR4435-2HG is observed in a variety of cancers, while its role in colorectal cancer is unknown. We aimed to demonstrate the relationship between MIR4435-2HG and colorectal cancer based on The Cancer Genome Atlas (TCGA) database. MATERIALS AND METHODS: Patients with colorectal can...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6450379/ https://www.ncbi.nlm.nih.gov/pubmed/30972258 http://dx.doi.org/10.7717/peerj.6683 |
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author | Ouyang, Wen Ren, Linlin Liu, Guohong Chi, Xiaosa Wei, Hongyun |
author_facet | Ouyang, Wen Ren, Linlin Liu, Guohong Chi, Xiaosa Wei, Hongyun |
author_sort | Ouyang, Wen |
collection | PubMed |
description | BACKGROUND: LncRNA MIR4435-2HG is observed in a variety of cancers, while its role in colorectal cancer is unknown. We aimed to demonstrate the relationship between MIR4435-2HG and colorectal cancer based on The Cancer Genome Atlas (TCGA) database. MATERIALS AND METHODS: Patients with colorectal cancer were collected from TCGA. We compared the expression of MIR4435-2HG in colorectal cancer and normal tissues with Wilcoxon rank sum test, and logistic regression was used to evaluate the relationship between MIR4435-2HG and clinicopathological characters. Moreover, Kaplan–Meier and Cox regression was performed to evaluate the correlation between MIR4435-2HG and survival rate. Gene set enrichment analysis (GSEA) was also conducted to annotate biological function of MIR4435-2HG. RESULTS: MIR4435-2HG level was elevated in colorectal cancer tissues. Increased level of MIR4435-2HG was significantly correlated with TNM stage (OR = 1.66 for T1/T2 vs. T3/T4; OR = 1.68 for N0 vs. N1/N2), stage (OR = 1.66 for stage 1/2 vs. stage 3/4), and carcinoembryonic antigen level before treatment (OR = 1.70 for <5 vs. ≥5) (all P-value <0.05). High MIR4435-2HG expression had a poorer progression-free survival (p = 0.048), and overall survival (OS) (P = 0.028), which were validated in the GSE92921 and GSE29621 datasets. MIR4435-2HG expression (P = 0.040, HR = 1.955 (95% CI [1.031–3.710])) was independently correlated with OS. GSEA demonstrated that the P38/MAPK pathway, the VEGF pathway, the cell adhesion molecules cams, the NOD-like receptor signaling pathway, the cell surface interactions at the vascular wall, and integrin cell surface interactions were differentially enriched in MIR4435-2HG high expression phenotype. CONCLUSIONS: Increased MIR4435-2HG might be a potential biomarker for the diagnosis and prognosis of colorectal cancer. Moreover, MIR4435-2HG might participate in the development of colorectal cancer via the P38/MAPK and VEGF pathway. |
format | Online Article Text |
id | pubmed-6450379 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | PeerJ Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-64503792019-04-10 LncRNA MIR4435-2HG predicts poor prognosis in patients with colorectal cancer Ouyang, Wen Ren, Linlin Liu, Guohong Chi, Xiaosa Wei, Hongyun PeerJ Gastroenterology and Hepatology BACKGROUND: LncRNA MIR4435-2HG is observed in a variety of cancers, while its role in colorectal cancer is unknown. We aimed to demonstrate the relationship between MIR4435-2HG and colorectal cancer based on The Cancer Genome Atlas (TCGA) database. MATERIALS AND METHODS: Patients with colorectal cancer were collected from TCGA. We compared the expression of MIR4435-2HG in colorectal cancer and normal tissues with Wilcoxon rank sum test, and logistic regression was used to evaluate the relationship between MIR4435-2HG and clinicopathological characters. Moreover, Kaplan–Meier and Cox regression was performed to evaluate the correlation between MIR4435-2HG and survival rate. Gene set enrichment analysis (GSEA) was also conducted to annotate biological function of MIR4435-2HG. RESULTS: MIR4435-2HG level was elevated in colorectal cancer tissues. Increased level of MIR4435-2HG was significantly correlated with TNM stage (OR = 1.66 for T1/T2 vs. T3/T4; OR = 1.68 for N0 vs. N1/N2), stage (OR = 1.66 for stage 1/2 vs. stage 3/4), and carcinoembryonic antigen level before treatment (OR = 1.70 for <5 vs. ≥5) (all P-value <0.05). High MIR4435-2HG expression had a poorer progression-free survival (p = 0.048), and overall survival (OS) (P = 0.028), which were validated in the GSE92921 and GSE29621 datasets. MIR4435-2HG expression (P = 0.040, HR = 1.955 (95% CI [1.031–3.710])) was independently correlated with OS. GSEA demonstrated that the P38/MAPK pathway, the VEGF pathway, the cell adhesion molecules cams, the NOD-like receptor signaling pathway, the cell surface interactions at the vascular wall, and integrin cell surface interactions were differentially enriched in MIR4435-2HG high expression phenotype. CONCLUSIONS: Increased MIR4435-2HG might be a potential biomarker for the diagnosis and prognosis of colorectal cancer. Moreover, MIR4435-2HG might participate in the development of colorectal cancer via the P38/MAPK and VEGF pathway. PeerJ Inc. 2019-04-02 /pmc/articles/PMC6450379/ /pubmed/30972258 http://dx.doi.org/10.7717/peerj.6683 Text en © 2019 Ouyang et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited. |
spellingShingle | Gastroenterology and Hepatology Ouyang, Wen Ren, Linlin Liu, Guohong Chi, Xiaosa Wei, Hongyun LncRNA MIR4435-2HG predicts poor prognosis in patients with colorectal cancer |
title | LncRNA MIR4435-2HG predicts poor prognosis in patients with colorectal cancer |
title_full | LncRNA MIR4435-2HG predicts poor prognosis in patients with colorectal cancer |
title_fullStr | LncRNA MIR4435-2HG predicts poor prognosis in patients with colorectal cancer |
title_full_unstemmed | LncRNA MIR4435-2HG predicts poor prognosis in patients with colorectal cancer |
title_short | LncRNA MIR4435-2HG predicts poor prognosis in patients with colorectal cancer |
title_sort | lncrna mir4435-2hg predicts poor prognosis in patients with colorectal cancer |
topic | Gastroenterology and Hepatology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6450379/ https://www.ncbi.nlm.nih.gov/pubmed/30972258 http://dx.doi.org/10.7717/peerj.6683 |
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