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Weakly supervised lesion localization for age-related macular degeneration detection using optical coherence tomography images

Age-related macular degeneration (AMD) is the main cause of irreversible blindness among the elderly and require early diagnosis to prevent vision loss, and careful treatment is essential. Optical coherence tomography (OCT), the most commonly used imaging method in the retinal area for the diagnosis...

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Autores principales: Yang, Hyun-Lim, Kim, Jong Jin, Kim, Jong Ho, Kang, Yong Koo, Park, Dong Ho, Park, Han Sang, Kim, Hong Kyun, Kim, Min-Soo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6450633/
https://www.ncbi.nlm.nih.gov/pubmed/30951557
http://dx.doi.org/10.1371/journal.pone.0215076
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author Yang, Hyun-Lim
Kim, Jong Jin
Kim, Jong Ho
Kang, Yong Koo
Park, Dong Ho
Park, Han Sang
Kim, Hong Kyun
Kim, Min-Soo
author_facet Yang, Hyun-Lim
Kim, Jong Jin
Kim, Jong Ho
Kang, Yong Koo
Park, Dong Ho
Park, Han Sang
Kim, Hong Kyun
Kim, Min-Soo
author_sort Yang, Hyun-Lim
collection PubMed
description Age-related macular degeneration (AMD) is the main cause of irreversible blindness among the elderly and require early diagnosis to prevent vision loss, and careful treatment is essential. Optical coherence tomography (OCT), the most commonly used imaging method in the retinal area for the diagnosis of AMD, is usually interpreted by a clinician, and OCT can help diagnose disease on the basis of the relevant diagnostic criteria, but these judgments can be somewhat subjective. We propose an algorithm for the detection of AMD based on a weakly supervised convolutional neural network (CNN) model to support computer-aided diagnosis (CAD) system. Our main contributions are the following three things. (1) We propose a concise CNN model for OCT images, which outperforms the existing large CNN models using VGG16 and GoogLeNet architectures. (2) We propose an algorithm called Expressive Gradients (EG) that extends the existing Integrated Gradients (IG) algorithm so as to exploit not only the input-level attribution map, but also the high-level attribution maps. Due to enriched gradients, EG can highlight suspicious regions for diagnosis of AMD better than the guided-backpropagation method and IG. (3) Our method provides two visualization options: overlay and top-k bounding boxes, which would be useful for CAD. Through experimental evaluation using 10,100 clinical OCT images from AMD patients, we demonstrate that our EG algorithm outperforms the IG algorithm in terms of localization accuracy and also outperforms the existing object detection methods in terms of class accuracy.
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spelling pubmed-64506332019-04-19 Weakly supervised lesion localization for age-related macular degeneration detection using optical coherence tomography images Yang, Hyun-Lim Kim, Jong Jin Kim, Jong Ho Kang, Yong Koo Park, Dong Ho Park, Han Sang Kim, Hong Kyun Kim, Min-Soo PLoS One Research Article Age-related macular degeneration (AMD) is the main cause of irreversible blindness among the elderly and require early diagnosis to prevent vision loss, and careful treatment is essential. Optical coherence tomography (OCT), the most commonly used imaging method in the retinal area for the diagnosis of AMD, is usually interpreted by a clinician, and OCT can help diagnose disease on the basis of the relevant diagnostic criteria, but these judgments can be somewhat subjective. We propose an algorithm for the detection of AMD based on a weakly supervised convolutional neural network (CNN) model to support computer-aided diagnosis (CAD) system. Our main contributions are the following three things. (1) We propose a concise CNN model for OCT images, which outperforms the existing large CNN models using VGG16 and GoogLeNet architectures. (2) We propose an algorithm called Expressive Gradients (EG) that extends the existing Integrated Gradients (IG) algorithm so as to exploit not only the input-level attribution map, but also the high-level attribution maps. Due to enriched gradients, EG can highlight suspicious regions for diagnosis of AMD better than the guided-backpropagation method and IG. (3) Our method provides two visualization options: overlay and top-k bounding boxes, which would be useful for CAD. Through experimental evaluation using 10,100 clinical OCT images from AMD patients, we demonstrate that our EG algorithm outperforms the IG algorithm in terms of localization accuracy and also outperforms the existing object detection methods in terms of class accuracy. Public Library of Science 2019-04-05 /pmc/articles/PMC6450633/ /pubmed/30951557 http://dx.doi.org/10.1371/journal.pone.0215076 Text en © 2019 Yang et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Yang, Hyun-Lim
Kim, Jong Jin
Kim, Jong Ho
Kang, Yong Koo
Park, Dong Ho
Park, Han Sang
Kim, Hong Kyun
Kim, Min-Soo
Weakly supervised lesion localization for age-related macular degeneration detection using optical coherence tomography images
title Weakly supervised lesion localization for age-related macular degeneration detection using optical coherence tomography images
title_full Weakly supervised lesion localization for age-related macular degeneration detection using optical coherence tomography images
title_fullStr Weakly supervised lesion localization for age-related macular degeneration detection using optical coherence tomography images
title_full_unstemmed Weakly supervised lesion localization for age-related macular degeneration detection using optical coherence tomography images
title_short Weakly supervised lesion localization for age-related macular degeneration detection using optical coherence tomography images
title_sort weakly supervised lesion localization for age-related macular degeneration detection using optical coherence tomography images
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6450633/
https://www.ncbi.nlm.nih.gov/pubmed/30951557
http://dx.doi.org/10.1371/journal.pone.0215076
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