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Protein Interaction Mapping related to Becker Muscular Dystrophy

OBJECTIVE: Becker Muscular Dystrophy (BMD) is a neuromuscular disorder which is incurable. In this research protein interaction network of most associated proteins with BMD to provide better clarification of disorder underlying mechanism was investigated. MATERIALS & METHODS: The related genes t...

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Autores principales: PEYVANDI, Ali Azghar, OKHOVATIAN, Farshad, REZAEI TAVIRANI, Majid, ZAMANIAN AZODI, Mona, REZAEI TAVIRANI, Mostafa
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Shahid Beheshti University of Medical Sciences 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6451862/
https://www.ncbi.nlm.nih.gov/pubmed/31037085
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author PEYVANDI, Ali Azghar
OKHOVATIAN, Farshad
REZAEI TAVIRANI, Majid
ZAMANIAN AZODI, Mona
REZAEI TAVIRANI, Mostafa
author_facet PEYVANDI, Ali Azghar
OKHOVATIAN, Farshad
REZAEI TAVIRANI, Majid
ZAMANIAN AZODI, Mona
REZAEI TAVIRANI, Mostafa
author_sort PEYVANDI, Ali Azghar
collection PubMed
description OBJECTIVE: Becker Muscular Dystrophy (BMD) is a neuromuscular disorder which is incurable. In this research protein interaction network of most associated proteins with BMD to provide better clarification of disorder underlying mechanism was investigated. MATERIALS & METHODS: The related genes to BMD were retrieved via string database and conducted by Cytoscape and the related algorithms. The network centrality analysis was performed based on degree, betweenness, closeness, and stress parameters. Gene ontology and clustering were performed via ClueGO analysis. RESULTS: DMD as the super-hub as well as other central proteins including UTRN, TTN, DNM2, and RYR1 are important in BMD in terms of interactive features. The impairment of muscular contraction may be vital in BMD disease pathogenesis as it is the highlighted biological process term obtained by ClueGO analysis. CONCLUSION: DMD targeting may be the main concern for dystrophy clinical approaches. However, the other suggested proteins should be evaluated. Targeting these key proteins are required for treatment goals following extensive validation studies.
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spelling pubmed-64518622019-06-01 Protein Interaction Mapping related to Becker Muscular Dystrophy PEYVANDI, Ali Azghar OKHOVATIAN, Farshad REZAEI TAVIRANI, Majid ZAMANIAN AZODI, Mona REZAEI TAVIRANI, Mostafa Iran J Child Neurol Original Article OBJECTIVE: Becker Muscular Dystrophy (BMD) is a neuromuscular disorder which is incurable. In this research protein interaction network of most associated proteins with BMD to provide better clarification of disorder underlying mechanism was investigated. MATERIALS & METHODS: The related genes to BMD were retrieved via string database and conducted by Cytoscape and the related algorithms. The network centrality analysis was performed based on degree, betweenness, closeness, and stress parameters. Gene ontology and clustering were performed via ClueGO analysis. RESULTS: DMD as the super-hub as well as other central proteins including UTRN, TTN, DNM2, and RYR1 are important in BMD in terms of interactive features. The impairment of muscular contraction may be vital in BMD disease pathogenesis as it is the highlighted biological process term obtained by ClueGO analysis. CONCLUSION: DMD targeting may be the main concern for dystrophy clinical approaches. However, the other suggested proteins should be evaluated. Targeting these key proteins are required for treatment goals following extensive validation studies. Shahid Beheshti University of Medical Sciences 2019 /pmc/articles/PMC6451862/ /pubmed/31037085 Text en This is an Open Access article distributed under the terms of the Creative Commons Attribution License, (http://creativecommons.org/licenses/by/3.0/) which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Article
PEYVANDI, Ali Azghar
OKHOVATIAN, Farshad
REZAEI TAVIRANI, Majid
ZAMANIAN AZODI, Mona
REZAEI TAVIRANI, Mostafa
Protein Interaction Mapping related to Becker Muscular Dystrophy
title Protein Interaction Mapping related to Becker Muscular Dystrophy
title_full Protein Interaction Mapping related to Becker Muscular Dystrophy
title_fullStr Protein Interaction Mapping related to Becker Muscular Dystrophy
title_full_unstemmed Protein Interaction Mapping related to Becker Muscular Dystrophy
title_short Protein Interaction Mapping related to Becker Muscular Dystrophy
title_sort protein interaction mapping related to becker muscular dystrophy
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6451862/
https://www.ncbi.nlm.nih.gov/pubmed/31037085
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