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Protein Interaction Mapping related to Becker Muscular Dystrophy
OBJECTIVE: Becker Muscular Dystrophy (BMD) is a neuromuscular disorder which is incurable. In this research protein interaction network of most associated proteins with BMD to provide better clarification of disorder underlying mechanism was investigated. MATERIALS & METHODS: The related genes t...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Shahid Beheshti University of Medical Sciences
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6451862/ https://www.ncbi.nlm.nih.gov/pubmed/31037085 |
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author | PEYVANDI, Ali Azghar OKHOVATIAN, Farshad REZAEI TAVIRANI, Majid ZAMANIAN AZODI, Mona REZAEI TAVIRANI, Mostafa |
author_facet | PEYVANDI, Ali Azghar OKHOVATIAN, Farshad REZAEI TAVIRANI, Majid ZAMANIAN AZODI, Mona REZAEI TAVIRANI, Mostafa |
author_sort | PEYVANDI, Ali Azghar |
collection | PubMed |
description | OBJECTIVE: Becker Muscular Dystrophy (BMD) is a neuromuscular disorder which is incurable. In this research protein interaction network of most associated proteins with BMD to provide better clarification of disorder underlying mechanism was investigated. MATERIALS & METHODS: The related genes to BMD were retrieved via string database and conducted by Cytoscape and the related algorithms. The network centrality analysis was performed based on degree, betweenness, closeness, and stress parameters. Gene ontology and clustering were performed via ClueGO analysis. RESULTS: DMD as the super-hub as well as other central proteins including UTRN, TTN, DNM2, and RYR1 are important in BMD in terms of interactive features. The impairment of muscular contraction may be vital in BMD disease pathogenesis as it is the highlighted biological process term obtained by ClueGO analysis. CONCLUSION: DMD targeting may be the main concern for dystrophy clinical approaches. However, the other suggested proteins should be evaluated. Targeting these key proteins are required for treatment goals following extensive validation studies. |
format | Online Article Text |
id | pubmed-6451862 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Shahid Beheshti University of Medical Sciences |
record_format | MEDLINE/PubMed |
spelling | pubmed-64518622019-06-01 Protein Interaction Mapping related to Becker Muscular Dystrophy PEYVANDI, Ali Azghar OKHOVATIAN, Farshad REZAEI TAVIRANI, Majid ZAMANIAN AZODI, Mona REZAEI TAVIRANI, Mostafa Iran J Child Neurol Original Article OBJECTIVE: Becker Muscular Dystrophy (BMD) is a neuromuscular disorder which is incurable. In this research protein interaction network of most associated proteins with BMD to provide better clarification of disorder underlying mechanism was investigated. MATERIALS & METHODS: The related genes to BMD were retrieved via string database and conducted by Cytoscape and the related algorithms. The network centrality analysis was performed based on degree, betweenness, closeness, and stress parameters. Gene ontology and clustering were performed via ClueGO analysis. RESULTS: DMD as the super-hub as well as other central proteins including UTRN, TTN, DNM2, and RYR1 are important in BMD in terms of interactive features. The impairment of muscular contraction may be vital in BMD disease pathogenesis as it is the highlighted biological process term obtained by ClueGO analysis. CONCLUSION: DMD targeting may be the main concern for dystrophy clinical approaches. However, the other suggested proteins should be evaluated. Targeting these key proteins are required for treatment goals following extensive validation studies. Shahid Beheshti University of Medical Sciences 2019 /pmc/articles/PMC6451862/ /pubmed/31037085 Text en This is an Open Access article distributed under the terms of the Creative Commons Attribution License, (http://creativecommons.org/licenses/by/3.0/) which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article PEYVANDI, Ali Azghar OKHOVATIAN, Farshad REZAEI TAVIRANI, Majid ZAMANIAN AZODI, Mona REZAEI TAVIRANI, Mostafa Protein Interaction Mapping related to Becker Muscular Dystrophy |
title | Protein Interaction Mapping related to Becker Muscular Dystrophy |
title_full | Protein Interaction Mapping related to Becker Muscular Dystrophy |
title_fullStr | Protein Interaction Mapping related to Becker Muscular Dystrophy |
title_full_unstemmed | Protein Interaction Mapping related to Becker Muscular Dystrophy |
title_short | Protein Interaction Mapping related to Becker Muscular Dystrophy |
title_sort | protein interaction mapping related to becker muscular dystrophy |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6451862/ https://www.ncbi.nlm.nih.gov/pubmed/31037085 |
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