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Fungal Diversity and Enzyme Activity Associated with the Macroalgae, Agarum clathratum
Agarum clathratum, a brown macroalgae species, has recently become a serious environmental problem on the coasts of Korea. In an effort to solve this problem, fungal diversity associated with decaying A. clathratum was investigated and related β-glucosidase and endoglucanase activities were describe...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6452909/ https://www.ncbi.nlm.nih.gov/pubmed/31001450 http://dx.doi.org/10.1080/12298093.2019.1580464 |
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author | Lee, Seobihn Park, Myung Soo Lee, Hanbyul Kim, Jae-Jin Eimes, John A. Lim, Young Woon |
author_facet | Lee, Seobihn Park, Myung Soo Lee, Hanbyul Kim, Jae-Jin Eimes, John A. Lim, Young Woon |
author_sort | Lee, Seobihn |
collection | PubMed |
description | Agarum clathratum, a brown macroalgae species, has recently become a serious environmental problem on the coasts of Korea. In an effort to solve this problem, fungal diversity associated with decaying A. clathratum was investigated and related β-glucosidase and endoglucanase activities were described. A total of 233 fungal strains were isolated from A. clathratum at 15 sites and identified 89 species based on morphology and a multigene analysis using the internal transcribed spacer region (ITS) and protein-coding genes including actin (act), β-tubulin (benA), calmodulin (CaM), and translation elongation factor (tef1). Acremonium, Corollospora, and Penicillium were the dominant genera, and Acremonium fuci and Corollospora gracilis were the dominant species. Fifty-one species exhibited cellulase activity, with A. fuci, Alfaria terrestris, Hypoxylon perforatum, P. madriti, and Pleosporales sp. Five showing the highest enzyme activities. Further enzyme quantification confirmed that these species had higher cellulase activity than P. crysogenum, a fungal species described in previous studies. This study lays the groundwork for bioremediation using fungi to remove decaying seaweed from populated areas and provides important background for potential industrial applications of environmentally friendly processes. |
format | Online Article Text |
id | pubmed-6452909 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-64529092019-04-18 Fungal Diversity and Enzyme Activity Associated with the Macroalgae, Agarum clathratum Lee, Seobihn Park, Myung Soo Lee, Hanbyul Kim, Jae-Jin Eimes, John A. Lim, Young Woon Mycobiology Research Articles Agarum clathratum, a brown macroalgae species, has recently become a serious environmental problem on the coasts of Korea. In an effort to solve this problem, fungal diversity associated with decaying A. clathratum was investigated and related β-glucosidase and endoglucanase activities were described. A total of 233 fungal strains were isolated from A. clathratum at 15 sites and identified 89 species based on morphology and a multigene analysis using the internal transcribed spacer region (ITS) and protein-coding genes including actin (act), β-tubulin (benA), calmodulin (CaM), and translation elongation factor (tef1). Acremonium, Corollospora, and Penicillium were the dominant genera, and Acremonium fuci and Corollospora gracilis were the dominant species. Fifty-one species exhibited cellulase activity, with A. fuci, Alfaria terrestris, Hypoxylon perforatum, P. madriti, and Pleosporales sp. Five showing the highest enzyme activities. Further enzyme quantification confirmed that these species had higher cellulase activity than P. crysogenum, a fungal species described in previous studies. This study lays the groundwork for bioremediation using fungi to remove decaying seaweed from populated areas and provides important background for potential industrial applications of environmentally friendly processes. Taylor & Francis 2019-03-01 /pmc/articles/PMC6452909/ /pubmed/31001450 http://dx.doi.org/10.1080/12298093.2019.1580464 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group on behalf of the Korean Society of Mycology. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Articles Lee, Seobihn Park, Myung Soo Lee, Hanbyul Kim, Jae-Jin Eimes, John A. Lim, Young Woon Fungal Diversity and Enzyme Activity Associated with the Macroalgae, Agarum clathratum |
title | Fungal Diversity and Enzyme Activity Associated with the Macroalgae, Agarum clathratum
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title_full | Fungal Diversity and Enzyme Activity Associated with the Macroalgae, Agarum clathratum
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title_fullStr | Fungal Diversity and Enzyme Activity Associated with the Macroalgae, Agarum clathratum
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title_full_unstemmed | Fungal Diversity and Enzyme Activity Associated with the Macroalgae, Agarum clathratum
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title_short | Fungal Diversity and Enzyme Activity Associated with the Macroalgae, Agarum clathratum
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title_sort | fungal diversity and enzyme activity associated with the macroalgae, agarum clathratum |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6452909/ https://www.ncbi.nlm.nih.gov/pubmed/31001450 http://dx.doi.org/10.1080/12298093.2019.1580464 |
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