Cargando…

Fungal Diversity and Enzyme Activity Associated with the Macroalgae, Agarum clathratum

Agarum clathratum, a brown macroalgae species, has recently become a serious environmental problem on the coasts of Korea. In an effort to solve this problem, fungal diversity associated with decaying A. clathratum was investigated and related β-glucosidase and endoglucanase activities were describe...

Descripción completa

Detalles Bibliográficos
Autores principales: Lee, Seobihn, Park, Myung Soo, Lee, Hanbyul, Kim, Jae-Jin, Eimes, John A., Lim, Young Woon
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6452909/
https://www.ncbi.nlm.nih.gov/pubmed/31001450
http://dx.doi.org/10.1080/12298093.2019.1580464
_version_ 1783409358550335488
author Lee, Seobihn
Park, Myung Soo
Lee, Hanbyul
Kim, Jae-Jin
Eimes, John A.
Lim, Young Woon
author_facet Lee, Seobihn
Park, Myung Soo
Lee, Hanbyul
Kim, Jae-Jin
Eimes, John A.
Lim, Young Woon
author_sort Lee, Seobihn
collection PubMed
description Agarum clathratum, a brown macroalgae species, has recently become a serious environmental problem on the coasts of Korea. In an effort to solve this problem, fungal diversity associated with decaying A. clathratum was investigated and related β-glucosidase and endoglucanase activities were described. A total of 233 fungal strains were isolated from A. clathratum at 15 sites and identified 89 species based on morphology and a multigene analysis using the internal transcribed spacer region (ITS) and protein-coding genes including actin (act), β-tubulin (benA), calmodulin (CaM), and translation elongation factor (tef1). Acremonium, Corollospora, and Penicillium were the dominant genera, and Acremonium fuci and Corollospora gracilis were the dominant species. Fifty-one species exhibited cellulase activity, with A. fuci, Alfaria terrestris, Hypoxylon perforatum, P. madriti, and Pleosporales sp. Five showing the highest enzyme activities. Further enzyme quantification confirmed that these species had higher cellulase activity than P. crysogenum, a fungal species described in previous studies. This study lays the groundwork for bioremediation using fungi to remove decaying seaweed from populated areas and provides important background for potential industrial applications of environmentally friendly processes.
format Online
Article
Text
id pubmed-6452909
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-64529092019-04-18 Fungal Diversity and Enzyme Activity Associated with the Macroalgae, Agarum clathratum Lee, Seobihn Park, Myung Soo Lee, Hanbyul Kim, Jae-Jin Eimes, John A. Lim, Young Woon Mycobiology Research Articles Agarum clathratum, a brown macroalgae species, has recently become a serious environmental problem on the coasts of Korea. In an effort to solve this problem, fungal diversity associated with decaying A. clathratum was investigated and related β-glucosidase and endoglucanase activities were described. A total of 233 fungal strains were isolated from A. clathratum at 15 sites and identified 89 species based on morphology and a multigene analysis using the internal transcribed spacer region (ITS) and protein-coding genes including actin (act), β-tubulin (benA), calmodulin (CaM), and translation elongation factor (tef1). Acremonium, Corollospora, and Penicillium were the dominant genera, and Acremonium fuci and Corollospora gracilis were the dominant species. Fifty-one species exhibited cellulase activity, with A. fuci, Alfaria terrestris, Hypoxylon perforatum, P. madriti, and Pleosporales sp. Five showing the highest enzyme activities. Further enzyme quantification confirmed that these species had higher cellulase activity than P. crysogenum, a fungal species described in previous studies. This study lays the groundwork for bioremediation using fungi to remove decaying seaweed from populated areas and provides important background for potential industrial applications of environmentally friendly processes. Taylor & Francis 2019-03-01 /pmc/articles/PMC6452909/ /pubmed/31001450 http://dx.doi.org/10.1080/12298093.2019.1580464 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group on behalf of the Korean Society of Mycology. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Lee, Seobihn
Park, Myung Soo
Lee, Hanbyul
Kim, Jae-Jin
Eimes, John A.
Lim, Young Woon
Fungal Diversity and Enzyme Activity Associated with the Macroalgae, Agarum clathratum
title Fungal Diversity and Enzyme Activity Associated with the Macroalgae, Agarum clathratum
title_full Fungal Diversity and Enzyme Activity Associated with the Macroalgae, Agarum clathratum
title_fullStr Fungal Diversity and Enzyme Activity Associated with the Macroalgae, Agarum clathratum
title_full_unstemmed Fungal Diversity and Enzyme Activity Associated with the Macroalgae, Agarum clathratum
title_short Fungal Diversity and Enzyme Activity Associated with the Macroalgae, Agarum clathratum
title_sort fungal diversity and enzyme activity associated with the macroalgae, agarum clathratum
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6452909/
https://www.ncbi.nlm.nih.gov/pubmed/31001450
http://dx.doi.org/10.1080/12298093.2019.1580464
work_keys_str_mv AT leeseobihn fungaldiversityandenzymeactivityassociatedwiththemacroalgaeagarumclathratum
AT parkmyungsoo fungaldiversityandenzymeactivityassociatedwiththemacroalgaeagarumclathratum
AT leehanbyul fungaldiversityandenzymeactivityassociatedwiththemacroalgaeagarumclathratum
AT kimjaejin fungaldiversityandenzymeactivityassociatedwiththemacroalgaeagarumclathratum
AT eimesjohna fungaldiversityandenzymeactivityassociatedwiththemacroalgaeagarumclathratum
AT limyoungwoon fungaldiversityandenzymeactivityassociatedwiththemacroalgaeagarumclathratum