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Prediction of ISUP grading of clear cell renal cell carcinoma using support vector machine model based on CT images

BACKGROUND: To explore whether radiomics combined with computed tomography (CT) images can be used to establish a model for differentiating high grade (International Society of Urological Pathology [ISUP] grade III–IV) from low-grade (ISUP I–II) clear cell renal cell carcinoma (ccRCC). METHODS: For...

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Autores principales: Sun, Xiaoqing, Liu, Lin, Xu, Kai, Li, Wenhui, Huo, Ziqi, Liu, Heng, Shen, Tongxu, Pan, Feng, Jiang, Yuqing, Zhang, Mengchao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Wolters Kluwer Health 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6456158/
https://www.ncbi.nlm.nih.gov/pubmed/30946334
http://dx.doi.org/10.1097/MD.0000000000015022
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author Sun, Xiaoqing
Liu, Lin
Xu, Kai
Li, Wenhui
Huo, Ziqi
Liu, Heng
Shen, Tongxu
Pan, Feng
Jiang, Yuqing
Zhang, Mengchao
author_facet Sun, Xiaoqing
Liu, Lin
Xu, Kai
Li, Wenhui
Huo, Ziqi
Liu, Heng
Shen, Tongxu
Pan, Feng
Jiang, Yuqing
Zhang, Mengchao
author_sort Sun, Xiaoqing
collection PubMed
description BACKGROUND: To explore whether radiomics combined with computed tomography (CT) images can be used to establish a model for differentiating high grade (International Society of Urological Pathology [ISUP] grade III–IV) from low-grade (ISUP I–II) clear cell renal cell carcinoma (ccRCC). METHODS: For this retrospective study, 3-phase contrast-enhanced CT images were collected from 227 patients with pathologically confirmed ISUP-grade ccRCC (155 cases in the low-grade group and 72 cases in the high-grade group). First, we delineated the largest dimension of the tumor in the corticomedullary and nephrographic CT images to obtain the region of interest. Second, variance selection, single variable selection, and the least absolute shrinkage and selection operator were used to select features in the corticomedullary phase, nephrographic phase, and 2-phase union samples, respectively. Finally, a model was constructed using the optimal features, and the receiver operating characteristic curve and area under the curve (AUC) were used to evaluate the predictive performance of the features in the training and validation queues. A Z test was employed to compare the differences in AUC values. RESULTS: The support vector machine (SVM) model constructed using the screening features for the 2-stage joint samples can effectively distinguish between high- and low-grade ccRCC, and obtained the highest prediction accuracy. Its AUC values in the training queue and the validation queue were 0.88 and 0.91, respectively. The results of the Z test showed that the differences between the 3 groups were not statistically significant. CONCLUSION: The SVM model constructed by CT-based radiomic features can effectively identify the ISUP grades of ccRCC.
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spelling pubmed-64561582019-05-29 Prediction of ISUP grading of clear cell renal cell carcinoma using support vector machine model based on CT images Sun, Xiaoqing Liu, Lin Xu, Kai Li, Wenhui Huo, Ziqi Liu, Heng Shen, Tongxu Pan, Feng Jiang, Yuqing Zhang, Mengchao Medicine (Baltimore) Research Article BACKGROUND: To explore whether radiomics combined with computed tomography (CT) images can be used to establish a model for differentiating high grade (International Society of Urological Pathology [ISUP] grade III–IV) from low-grade (ISUP I–II) clear cell renal cell carcinoma (ccRCC). METHODS: For this retrospective study, 3-phase contrast-enhanced CT images were collected from 227 patients with pathologically confirmed ISUP-grade ccRCC (155 cases in the low-grade group and 72 cases in the high-grade group). First, we delineated the largest dimension of the tumor in the corticomedullary and nephrographic CT images to obtain the region of interest. Second, variance selection, single variable selection, and the least absolute shrinkage and selection operator were used to select features in the corticomedullary phase, nephrographic phase, and 2-phase union samples, respectively. Finally, a model was constructed using the optimal features, and the receiver operating characteristic curve and area under the curve (AUC) were used to evaluate the predictive performance of the features in the training and validation queues. A Z test was employed to compare the differences in AUC values. RESULTS: The support vector machine (SVM) model constructed using the screening features for the 2-stage joint samples can effectively distinguish between high- and low-grade ccRCC, and obtained the highest prediction accuracy. Its AUC values in the training queue and the validation queue were 0.88 and 0.91, respectively. The results of the Z test showed that the differences between the 3 groups were not statistically significant. CONCLUSION: The SVM model constructed by CT-based radiomic features can effectively identify the ISUP grades of ccRCC. Wolters Kluwer Health 2019-04-05 /pmc/articles/PMC6456158/ /pubmed/30946334 http://dx.doi.org/10.1097/MD.0000000000015022 Text en Copyright © 2019 the Author(s). Published by Wolters Kluwer Health, Inc. http://creativecommons.org/licenses/by/4.0 This is an open access article distributed under the Creative Commons Attribution License 4.0 (CCBY), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. http://creativecommons.org/licenses/by/4.0
spellingShingle Research Article
Sun, Xiaoqing
Liu, Lin
Xu, Kai
Li, Wenhui
Huo, Ziqi
Liu, Heng
Shen, Tongxu
Pan, Feng
Jiang, Yuqing
Zhang, Mengchao
Prediction of ISUP grading of clear cell renal cell carcinoma using support vector machine model based on CT images
title Prediction of ISUP grading of clear cell renal cell carcinoma using support vector machine model based on CT images
title_full Prediction of ISUP grading of clear cell renal cell carcinoma using support vector machine model based on CT images
title_fullStr Prediction of ISUP grading of clear cell renal cell carcinoma using support vector machine model based on CT images
title_full_unstemmed Prediction of ISUP grading of clear cell renal cell carcinoma using support vector machine model based on CT images
title_short Prediction of ISUP grading of clear cell renal cell carcinoma using support vector machine model based on CT images
title_sort prediction of isup grading of clear cell renal cell carcinoma using support vector machine model based on ct images
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6456158/
https://www.ncbi.nlm.nih.gov/pubmed/30946334
http://dx.doi.org/10.1097/MD.0000000000015022
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