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Satellitome landscape analysis of Megaleporinus macrocephalus (Teleostei, Anostomidae) reveals intense accumulation of satellite sequences on the heteromorphic sex chromosome

The accumulation of repetitive DNA sequences on the sex-limited W or Y chromosomes is a well-known process that is likely triggered by the suppression of recombination between the sex chromosomes, which leads to major differences in their sizes and genetic content. Here, we report an analysis conduc...

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Autores principales: Utsunomia, Ricardo, Silva, Duílio Mazzoni Zerbinato de Andrade, Ruiz-Ruano, Francisco J., Goes, Caio Augusto Gomes, Melo, Silvana, Ramos, Lucas Peres, Oliveira, Claudio, Porto-Foresti, Fábio, Foresti, Fausto, Hashimoto, Diogo Teruo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6458115/
https://www.ncbi.nlm.nih.gov/pubmed/30971780
http://dx.doi.org/10.1038/s41598-019-42383-8
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author Utsunomia, Ricardo
Silva, Duílio Mazzoni Zerbinato de Andrade
Ruiz-Ruano, Francisco J.
Goes, Caio Augusto Gomes
Melo, Silvana
Ramos, Lucas Peres
Oliveira, Claudio
Porto-Foresti, Fábio
Foresti, Fausto
Hashimoto, Diogo Teruo
author_facet Utsunomia, Ricardo
Silva, Duílio Mazzoni Zerbinato de Andrade
Ruiz-Ruano, Francisco J.
Goes, Caio Augusto Gomes
Melo, Silvana
Ramos, Lucas Peres
Oliveira, Claudio
Porto-Foresti, Fábio
Foresti, Fausto
Hashimoto, Diogo Teruo
author_sort Utsunomia, Ricardo
collection PubMed
description The accumulation of repetitive DNA sequences on the sex-limited W or Y chromosomes is a well-known process that is likely triggered by the suppression of recombination between the sex chromosomes, which leads to major differences in their sizes and genetic content. Here, we report an analysis conducted on the satellitome of Megaleporinus macrocephalus that focuses specifically on the satDNAs that have been shown to have higher abundances in females and are putatively located on the W chromosome in this species. We characterized 164 satellite families in M. macrocephalus, which is, by far, the most satellite-rich species discovered to date. Subsequently, we mapped 30 satellites, 22 of which were located on the W chromosome, and 14 were shown to exist only on the W chromosome. Finally, we report two simple, quick and reliable methods that can be used for sex identification in M. macrocephalus individuals using fin clips or scales, which could be applicable to future studies conducted in the field of aquaculture.
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spelling pubmed-64581152019-04-15 Satellitome landscape analysis of Megaleporinus macrocephalus (Teleostei, Anostomidae) reveals intense accumulation of satellite sequences on the heteromorphic sex chromosome Utsunomia, Ricardo Silva, Duílio Mazzoni Zerbinato de Andrade Ruiz-Ruano, Francisco J. Goes, Caio Augusto Gomes Melo, Silvana Ramos, Lucas Peres Oliveira, Claudio Porto-Foresti, Fábio Foresti, Fausto Hashimoto, Diogo Teruo Sci Rep Article The accumulation of repetitive DNA sequences on the sex-limited W or Y chromosomes is a well-known process that is likely triggered by the suppression of recombination between the sex chromosomes, which leads to major differences in their sizes and genetic content. Here, we report an analysis conducted on the satellitome of Megaleporinus macrocephalus that focuses specifically on the satDNAs that have been shown to have higher abundances in females and are putatively located on the W chromosome in this species. We characterized 164 satellite families in M. macrocephalus, which is, by far, the most satellite-rich species discovered to date. Subsequently, we mapped 30 satellites, 22 of which were located on the W chromosome, and 14 were shown to exist only on the W chromosome. Finally, we report two simple, quick and reliable methods that can be used for sex identification in M. macrocephalus individuals using fin clips or scales, which could be applicable to future studies conducted in the field of aquaculture. Nature Publishing Group UK 2019-04-10 /pmc/articles/PMC6458115/ /pubmed/30971780 http://dx.doi.org/10.1038/s41598-019-42383-8 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Utsunomia, Ricardo
Silva, Duílio Mazzoni Zerbinato de Andrade
Ruiz-Ruano, Francisco J.
Goes, Caio Augusto Gomes
Melo, Silvana
Ramos, Lucas Peres
Oliveira, Claudio
Porto-Foresti, Fábio
Foresti, Fausto
Hashimoto, Diogo Teruo
Satellitome landscape analysis of Megaleporinus macrocephalus (Teleostei, Anostomidae) reveals intense accumulation of satellite sequences on the heteromorphic sex chromosome
title Satellitome landscape analysis of Megaleporinus macrocephalus (Teleostei, Anostomidae) reveals intense accumulation of satellite sequences on the heteromorphic sex chromosome
title_full Satellitome landscape analysis of Megaleporinus macrocephalus (Teleostei, Anostomidae) reveals intense accumulation of satellite sequences on the heteromorphic sex chromosome
title_fullStr Satellitome landscape analysis of Megaleporinus macrocephalus (Teleostei, Anostomidae) reveals intense accumulation of satellite sequences on the heteromorphic sex chromosome
title_full_unstemmed Satellitome landscape analysis of Megaleporinus macrocephalus (Teleostei, Anostomidae) reveals intense accumulation of satellite sequences on the heteromorphic sex chromosome
title_short Satellitome landscape analysis of Megaleporinus macrocephalus (Teleostei, Anostomidae) reveals intense accumulation of satellite sequences on the heteromorphic sex chromosome
title_sort satellitome landscape analysis of megaleporinus macrocephalus (teleostei, anostomidae) reveals intense accumulation of satellite sequences on the heteromorphic sex chromosome
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6458115/
https://www.ncbi.nlm.nih.gov/pubmed/30971780
http://dx.doi.org/10.1038/s41598-019-42383-8
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