Cargando…

Machine learning based hierarchical classification of frontotemporal dementia and Alzheimer's disease

BACKGROUND: In a clinical setting, an individual subject classification model rather than a group analysis would be more informative. Specifically, the subtlety of cortical atrophy in some frontotemporal dementia (FTD) patients and overlapping patterns of atrophy among three FTD clinical syndromes i...

Descripción completa

Detalles Bibliográficos
Autores principales: Kim, Jun Pyo, Kim, Jeonghun, Park, Yu Hyun, Park, Seong Beom, Lee, Jin San, Yoo, Sole, Kim, Eun-Joo, Kim, Hee Jin, Na, Duk L., Brown, Jesse A., Lockhart, Samuel N., Seo, Sang Won, Seong, Joon-Kyung
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6458431/
https://www.ncbi.nlm.nih.gov/pubmed/30981204
http://dx.doi.org/10.1016/j.nicl.2019.101811
_version_ 1783410005908652032
author Kim, Jun Pyo
Kim, Jeonghun
Park, Yu Hyun
Park, Seong Beom
Lee, Jin San
Yoo, Sole
Kim, Eun-Joo
Kim, Hee Jin
Na, Duk L.
Brown, Jesse A.
Lockhart, Samuel N.
Seo, Sang Won
Seong, Joon-Kyung
author_facet Kim, Jun Pyo
Kim, Jeonghun
Park, Yu Hyun
Park, Seong Beom
Lee, Jin San
Yoo, Sole
Kim, Eun-Joo
Kim, Hee Jin
Na, Duk L.
Brown, Jesse A.
Lockhart, Samuel N.
Seo, Sang Won
Seong, Joon-Kyung
author_sort Kim, Jun Pyo
collection PubMed
description BACKGROUND: In a clinical setting, an individual subject classification model rather than a group analysis would be more informative. Specifically, the subtlety of cortical atrophy in some frontotemporal dementia (FTD) patients and overlapping patterns of atrophy among three FTD clinical syndromes including behavioral variant FTD (bvFTD), non-fluent/agrammatic variant primary progressive aphasia (nfvPPA), and semantic variant PPA (svPPA) give rise to the need for classification models at the individual level. In this study, we aimed to classify each individual subject into one of the diagnostic categories in a hierarchical manner by employing a machine learning-based classification method. METHODS: We recruited 143 patients with FTD, 50 patients with Alzheimer's disease (AD) dementia, and 146 cognitively normal subjects. All subjects underwent a three-dimensional volumetric brain magnetic resonance imaging (MRI) scan, and cortical thickness was measured using FreeSurfer. We applied the Laplace Beltrami operator to reduce noise in the cortical thickness data and to reduce the dimension of the feature vector. Classifiers were constructed by applying both principal component analysis and linear discriminant analysis to the cortical thickness data. For the hierarchical classification, we trained four classifiers using different pairs of groups: Step 1 - CN vs. FTD + AD, Step 2 - FTD vs. AD, Step 3 - bvFTD vs. PPA, Step 4 - svPPA vs. nfvPPA. To evaluate the classification performance for each step, we used a10-fold cross-validation approach, performed 1000 times for reliability. RESULTS: The classification accuracy of the entire hierarchical classification tree was 75.8%, which was higher than that of the non-hierarchical classifier (73.0%). The classification accuracies of steps 1–4 were 86.1%, 90.8%, 86.9%, and 92.1%, respectively. Changes in the right frontotemporal area were critical for discriminating behavioral variant FTD from PPA. The left frontal lobe discriminated nfvPPA from svPPA, while the bilateral anterior temporal regions were critical for identifying svPPA. CONCLUSIONS: In the present study, our automated classifier successfully classified FTD clinical subtypes with good to excellent accuracy. Our classifier may help clinicians diagnose FTD subtypes with subtle cortical atrophy and facilitate appropriate specific interventions.
format Online
Article
Text
id pubmed-6458431
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-64584312019-04-19 Machine learning based hierarchical classification of frontotemporal dementia and Alzheimer's disease Kim, Jun Pyo Kim, Jeonghun Park, Yu Hyun Park, Seong Beom Lee, Jin San Yoo, Sole Kim, Eun-Joo Kim, Hee Jin Na, Duk L. Brown, Jesse A. Lockhart, Samuel N. Seo, Sang Won Seong, Joon-Kyung Neuroimage Clin Regular Article BACKGROUND: In a clinical setting, an individual subject classification model rather than a group analysis would be more informative. Specifically, the subtlety of cortical atrophy in some frontotemporal dementia (FTD) patients and overlapping patterns of atrophy among three FTD clinical syndromes including behavioral variant FTD (bvFTD), non-fluent/agrammatic variant primary progressive aphasia (nfvPPA), and semantic variant PPA (svPPA) give rise to the need for classification models at the individual level. In this study, we aimed to classify each individual subject into one of the diagnostic categories in a hierarchical manner by employing a machine learning-based classification method. METHODS: We recruited 143 patients with FTD, 50 patients with Alzheimer's disease (AD) dementia, and 146 cognitively normal subjects. All subjects underwent a three-dimensional volumetric brain magnetic resonance imaging (MRI) scan, and cortical thickness was measured using FreeSurfer. We applied the Laplace Beltrami operator to reduce noise in the cortical thickness data and to reduce the dimension of the feature vector. Classifiers were constructed by applying both principal component analysis and linear discriminant analysis to the cortical thickness data. For the hierarchical classification, we trained four classifiers using different pairs of groups: Step 1 - CN vs. FTD + AD, Step 2 - FTD vs. AD, Step 3 - bvFTD vs. PPA, Step 4 - svPPA vs. nfvPPA. To evaluate the classification performance for each step, we used a10-fold cross-validation approach, performed 1000 times for reliability. RESULTS: The classification accuracy of the entire hierarchical classification tree was 75.8%, which was higher than that of the non-hierarchical classifier (73.0%). The classification accuracies of steps 1–4 were 86.1%, 90.8%, 86.9%, and 92.1%, respectively. Changes in the right frontotemporal area were critical for discriminating behavioral variant FTD from PPA. The left frontal lobe discriminated nfvPPA from svPPA, while the bilateral anterior temporal regions were critical for identifying svPPA. CONCLUSIONS: In the present study, our automated classifier successfully classified FTD clinical subtypes with good to excellent accuracy. Our classifier may help clinicians diagnose FTD subtypes with subtle cortical atrophy and facilitate appropriate specific interventions. Elsevier 2019-04-03 /pmc/articles/PMC6458431/ /pubmed/30981204 http://dx.doi.org/10.1016/j.nicl.2019.101811 Text en © 2019 Published by Elsevier Inc. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Regular Article
Kim, Jun Pyo
Kim, Jeonghun
Park, Yu Hyun
Park, Seong Beom
Lee, Jin San
Yoo, Sole
Kim, Eun-Joo
Kim, Hee Jin
Na, Duk L.
Brown, Jesse A.
Lockhart, Samuel N.
Seo, Sang Won
Seong, Joon-Kyung
Machine learning based hierarchical classification of frontotemporal dementia and Alzheimer's disease
title Machine learning based hierarchical classification of frontotemporal dementia and Alzheimer's disease
title_full Machine learning based hierarchical classification of frontotemporal dementia and Alzheimer's disease
title_fullStr Machine learning based hierarchical classification of frontotemporal dementia and Alzheimer's disease
title_full_unstemmed Machine learning based hierarchical classification of frontotemporal dementia and Alzheimer's disease
title_short Machine learning based hierarchical classification of frontotemporal dementia and Alzheimer's disease
title_sort machine learning based hierarchical classification of frontotemporal dementia and alzheimer's disease
topic Regular Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6458431/
https://www.ncbi.nlm.nih.gov/pubmed/30981204
http://dx.doi.org/10.1016/j.nicl.2019.101811
work_keys_str_mv AT kimjunpyo machinelearningbasedhierarchicalclassificationoffrontotemporaldementiaandalzheimersdisease
AT kimjeonghun machinelearningbasedhierarchicalclassificationoffrontotemporaldementiaandalzheimersdisease
AT parkyuhyun machinelearningbasedhierarchicalclassificationoffrontotemporaldementiaandalzheimersdisease
AT parkseongbeom machinelearningbasedhierarchicalclassificationoffrontotemporaldementiaandalzheimersdisease
AT leejinsan machinelearningbasedhierarchicalclassificationoffrontotemporaldementiaandalzheimersdisease
AT yoosole machinelearningbasedhierarchicalclassificationoffrontotemporaldementiaandalzheimersdisease
AT kimeunjoo machinelearningbasedhierarchicalclassificationoffrontotemporaldementiaandalzheimersdisease
AT kimheejin machinelearningbasedhierarchicalclassificationoffrontotemporaldementiaandalzheimersdisease
AT nadukl machinelearningbasedhierarchicalclassificationoffrontotemporaldementiaandalzheimersdisease
AT brownjessea machinelearningbasedhierarchicalclassificationoffrontotemporaldementiaandalzheimersdisease
AT lockhartsamueln machinelearningbasedhierarchicalclassificationoffrontotemporaldementiaandalzheimersdisease
AT seosangwon machinelearningbasedhierarchicalclassificationoffrontotemporaldementiaandalzheimersdisease
AT seongjoonkyung machinelearningbasedhierarchicalclassificationoffrontotemporaldementiaandalzheimersdisease