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Identification of ERBB Pathway-Activated Cells in Triple-Negative Breast Cancer

Intratumor heterogeneity within a single tumor mass is one of the hallmarks of malignancy and has been reported in various tumor types. The molecular characterization of intratumor heterogeneity in breast cancer is a significant challenge for effective treatment. Using single-cell RNA sequencing (RN...

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Detalles Bibliográficos
Autor principal: Cho, Soo Young
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Korea Genome Organization 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6459170/
https://www.ncbi.nlm.nih.gov/pubmed/30929404
http://dx.doi.org/10.5808/GI.2019.17.1.e3
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author Cho, Soo Young
author_facet Cho, Soo Young
author_sort Cho, Soo Young
collection PubMed
description Intratumor heterogeneity within a single tumor mass is one of the hallmarks of malignancy and has been reported in various tumor types. The molecular characterization of intratumor heterogeneity in breast cancer is a significant challenge for effective treatment. Using single-cell RNA sequencing (RNA-seq) data from a public resource, an ERBB pathway activated triple-negative cell population was identified. The differential expression of three subtyping marker genes (ERBB2, ESR1, and PGR) was not changed in the bulk RNA-seq data, but the single-cell transcriptomes showed intratumor heterogeneity. This result shows that ERBB signaling is activated using an indirect route and that the molecular subtype is changed on a single-cell level. Our data propose a different view on breast cancer subtypes, clarifying much confusion in this field and contributing to precision medicine.
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spelling pubmed-64591702019-04-19 Identification of ERBB Pathway-Activated Cells in Triple-Negative Breast Cancer Cho, Soo Young Genomics Inform Clinical Genomics Intratumor heterogeneity within a single tumor mass is one of the hallmarks of malignancy and has been reported in various tumor types. The molecular characterization of intratumor heterogeneity in breast cancer is a significant challenge for effective treatment. Using single-cell RNA sequencing (RNA-seq) data from a public resource, an ERBB pathway activated triple-negative cell population was identified. The differential expression of three subtyping marker genes (ERBB2, ESR1, and PGR) was not changed in the bulk RNA-seq data, but the single-cell transcriptomes showed intratumor heterogeneity. This result shows that ERBB signaling is activated using an indirect route and that the molecular subtype is changed on a single-cell level. Our data propose a different view on breast cancer subtypes, clarifying much confusion in this field and contributing to precision medicine. Korea Genome Organization 2019-03-31 /pmc/articles/PMC6459170/ /pubmed/30929404 http://dx.doi.org/10.5808/GI.2019.17.1.e3 Text en (c) 2019, Korea Genome Organization (CC) This is an open-access article distributed under the terms of the Creative Commons Attribution license(https://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Clinical Genomics
Cho, Soo Young
Identification of ERBB Pathway-Activated Cells in Triple-Negative Breast Cancer
title Identification of ERBB Pathway-Activated Cells in Triple-Negative Breast Cancer
title_full Identification of ERBB Pathway-Activated Cells in Triple-Negative Breast Cancer
title_fullStr Identification of ERBB Pathway-Activated Cells in Triple-Negative Breast Cancer
title_full_unstemmed Identification of ERBB Pathway-Activated Cells in Triple-Negative Breast Cancer
title_short Identification of ERBB Pathway-Activated Cells in Triple-Negative Breast Cancer
title_sort identification of erbb pathway-activated cells in triple-negative breast cancer
topic Clinical Genomics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6459170/
https://www.ncbi.nlm.nih.gov/pubmed/30929404
http://dx.doi.org/10.5808/GI.2019.17.1.e3
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