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Identification of ERBB Pathway-Activated Cells in Triple-Negative Breast Cancer
Intratumor heterogeneity within a single tumor mass is one of the hallmarks of malignancy and has been reported in various tumor types. The molecular characterization of intratumor heterogeneity in breast cancer is a significant challenge for effective treatment. Using single-cell RNA sequencing (RN...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Korea Genome Organization
2019
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6459170/ https://www.ncbi.nlm.nih.gov/pubmed/30929404 http://dx.doi.org/10.5808/GI.2019.17.1.e3 |
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author | Cho, Soo Young |
author_facet | Cho, Soo Young |
author_sort | Cho, Soo Young |
collection | PubMed |
description | Intratumor heterogeneity within a single tumor mass is one of the hallmarks of malignancy and has been reported in various tumor types. The molecular characterization of intratumor heterogeneity in breast cancer is a significant challenge for effective treatment. Using single-cell RNA sequencing (RNA-seq) data from a public resource, an ERBB pathway activated triple-negative cell population was identified. The differential expression of three subtyping marker genes (ERBB2, ESR1, and PGR) was not changed in the bulk RNA-seq data, but the single-cell transcriptomes showed intratumor heterogeneity. This result shows that ERBB signaling is activated using an indirect route and that the molecular subtype is changed on a single-cell level. Our data propose a different view on breast cancer subtypes, clarifying much confusion in this field and contributing to precision medicine. |
format | Online Article Text |
id | pubmed-6459170 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Korea Genome Organization |
record_format | MEDLINE/PubMed |
spelling | pubmed-64591702019-04-19 Identification of ERBB Pathway-Activated Cells in Triple-Negative Breast Cancer Cho, Soo Young Genomics Inform Clinical Genomics Intratumor heterogeneity within a single tumor mass is one of the hallmarks of malignancy and has been reported in various tumor types. The molecular characterization of intratumor heterogeneity in breast cancer is a significant challenge for effective treatment. Using single-cell RNA sequencing (RNA-seq) data from a public resource, an ERBB pathway activated triple-negative cell population was identified. The differential expression of three subtyping marker genes (ERBB2, ESR1, and PGR) was not changed in the bulk RNA-seq data, but the single-cell transcriptomes showed intratumor heterogeneity. This result shows that ERBB signaling is activated using an indirect route and that the molecular subtype is changed on a single-cell level. Our data propose a different view on breast cancer subtypes, clarifying much confusion in this field and contributing to precision medicine. Korea Genome Organization 2019-03-31 /pmc/articles/PMC6459170/ /pubmed/30929404 http://dx.doi.org/10.5808/GI.2019.17.1.e3 Text en (c) 2019, Korea Genome Organization (CC) This is an open-access article distributed under the terms of the Creative Commons Attribution license(https://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Clinical Genomics Cho, Soo Young Identification of ERBB Pathway-Activated Cells in Triple-Negative Breast Cancer |
title | Identification of ERBB Pathway-Activated Cells in Triple-Negative Breast Cancer |
title_full | Identification of ERBB Pathway-Activated Cells in Triple-Negative Breast Cancer |
title_fullStr | Identification of ERBB Pathway-Activated Cells in Triple-Negative Breast Cancer |
title_full_unstemmed | Identification of ERBB Pathway-Activated Cells in Triple-Negative Breast Cancer |
title_short | Identification of ERBB Pathway-Activated Cells in Triple-Negative Breast Cancer |
title_sort | identification of erbb pathway-activated cells in triple-negative breast cancer |
topic | Clinical Genomics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6459170/ https://www.ncbi.nlm.nih.gov/pubmed/30929404 http://dx.doi.org/10.5808/GI.2019.17.1.e3 |
work_keys_str_mv | AT chosooyoung identificationoferbbpathwayactivatedcellsintriplenegativebreastcancer |