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The use of clade‐specific PCR assays to identify novel nitrilase genes from environmental isolates

Nitrilase enzymes (EC 3.5.5.1) are responsible for the direct hydration of nitriles to their corresponding carboxylic acids and ammonia. The utilization of nitrilase enzymes in biocatalysis toward bio‐pharmaceuticals and industrial applications facilitates the move towards green chemistry. The body...

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Autores principales: Dooley‐Cullinane, Tríona‐Marie, O'Reilly, Catherine, Aslam, Bilal, Weiner, David P., O'Neill, David, Owens, Erica, O'Meara, Denise, Coffey, Lee
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6460282/
https://www.ncbi.nlm.nih.gov/pubmed/30597773
http://dx.doi.org/10.1002/mbo3.700
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author Dooley‐Cullinane, Tríona‐Marie
O'Reilly, Catherine
Aslam, Bilal
Weiner, David P.
O'Neill, David
Owens, Erica
O'Meara, Denise
Coffey, Lee
author_facet Dooley‐Cullinane, Tríona‐Marie
O'Reilly, Catherine
Aslam, Bilal
Weiner, David P.
O'Neill, David
Owens, Erica
O'Meara, Denise
Coffey, Lee
author_sort Dooley‐Cullinane, Tríona‐Marie
collection PubMed
description Nitrilase enzymes (EC 3.5.5.1) are responsible for the direct hydration of nitriles to their corresponding carboxylic acids and ammonia. The utilization of nitrilase enzymes in biocatalysis toward bio‐pharmaceuticals and industrial applications facilitates the move towards green chemistry. The body of research presented describes a novel clade‐specific touchdown PCR protocol for the detection of novel nitrilase genes. The presented study identified partial sequences of 15 novel nitrilase genes across 7 genera, with partial DNA sequence homology (%) displayed across an additional 16 genera. This research will prove valuable in the screening of microorganisms for the identification of novel clade‐specific nitrilase genes, with predicted enantioselective profiles as determined by their clade characterizations.
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spelling pubmed-64602822019-04-22 The use of clade‐specific PCR assays to identify novel nitrilase genes from environmental isolates Dooley‐Cullinane, Tríona‐Marie O'Reilly, Catherine Aslam, Bilal Weiner, David P. O'Neill, David Owens, Erica O'Meara, Denise Coffey, Lee Microbiologyopen Original Articles Nitrilase enzymes (EC 3.5.5.1) are responsible for the direct hydration of nitriles to their corresponding carboxylic acids and ammonia. The utilization of nitrilase enzymes in biocatalysis toward bio‐pharmaceuticals and industrial applications facilitates the move towards green chemistry. The body of research presented describes a novel clade‐specific touchdown PCR protocol for the detection of novel nitrilase genes. The presented study identified partial sequences of 15 novel nitrilase genes across 7 genera, with partial DNA sequence homology (%) displayed across an additional 16 genera. This research will prove valuable in the screening of microorganisms for the identification of novel clade‐specific nitrilase genes, with predicted enantioselective profiles as determined by their clade characterizations. John Wiley and Sons Inc. 2018-12-30 /pmc/articles/PMC6460282/ /pubmed/30597773 http://dx.doi.org/10.1002/mbo3.700 Text en © 2018 The Authors. MicrobiologyOpen published by John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Articles
Dooley‐Cullinane, Tríona‐Marie
O'Reilly, Catherine
Aslam, Bilal
Weiner, David P.
O'Neill, David
Owens, Erica
O'Meara, Denise
Coffey, Lee
The use of clade‐specific PCR assays to identify novel nitrilase genes from environmental isolates
title The use of clade‐specific PCR assays to identify novel nitrilase genes from environmental isolates
title_full The use of clade‐specific PCR assays to identify novel nitrilase genes from environmental isolates
title_fullStr The use of clade‐specific PCR assays to identify novel nitrilase genes from environmental isolates
title_full_unstemmed The use of clade‐specific PCR assays to identify novel nitrilase genes from environmental isolates
title_short The use of clade‐specific PCR assays to identify novel nitrilase genes from environmental isolates
title_sort use of clade‐specific pcr assays to identify novel nitrilase genes from environmental isolates
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6460282/
https://www.ncbi.nlm.nih.gov/pubmed/30597773
http://dx.doi.org/10.1002/mbo3.700
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