Cargando…

Limited Sequence Diversity Within a Population Supports Prebiotic RNA Reproduction

The origins of life require the emergence of informational polymers capable of reproduction. In the RNA world on the primordial Earth, reproducible RNA molecules would have arisen from a mixture of compositionally biased, poorly available, short RNA sequences in prebiotic environments. However, it r...

Descripción completa

Detalles Bibliográficos
Autores principales: Mizuuchi, Ryo, Lehman, Niles
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6463154/
https://www.ncbi.nlm.nih.gov/pubmed/30795529
http://dx.doi.org/10.3390/life9010020
_version_ 1783410713980567552
author Mizuuchi, Ryo
Lehman, Niles
author_facet Mizuuchi, Ryo
Lehman, Niles
author_sort Mizuuchi, Ryo
collection PubMed
description The origins of life require the emergence of informational polymers capable of reproduction. In the RNA world on the primordial Earth, reproducible RNA molecules would have arisen from a mixture of compositionally biased, poorly available, short RNA sequences in prebiotic environments. However, it remains unclear what level of sequence diversity within a small subset of population is required to initiate RNA reproduction by prebiotic mechanisms. Here, using a simulation for template-directed recombination and ligation, we explore the effect of sequence diversity in a given population for the onset of RNA reproduction. We show that RNA reproduction is improbable in low and high diversity of finite populations; however, it could robustly occur in an intermediate sequence diversity. The intermediate range broadens toward higher diversity as population size increases. We also found that emergent reproducible RNAs likely form autocatalytic networks and collectively reproduce by catalyzing the formation of each other, allowing the expansion of information capacity. These results highlight the potential of abiotic RNAs, neither abundant nor diverse, to kick-start autocatalytic reproduction through spontaneous network formation.
format Online
Article
Text
id pubmed-6463154
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-64631542019-04-22 Limited Sequence Diversity Within a Population Supports Prebiotic RNA Reproduction Mizuuchi, Ryo Lehman, Niles Life (Basel) Article The origins of life require the emergence of informational polymers capable of reproduction. In the RNA world on the primordial Earth, reproducible RNA molecules would have arisen from a mixture of compositionally biased, poorly available, short RNA sequences in prebiotic environments. However, it remains unclear what level of sequence diversity within a small subset of population is required to initiate RNA reproduction by prebiotic mechanisms. Here, using a simulation for template-directed recombination and ligation, we explore the effect of sequence diversity in a given population for the onset of RNA reproduction. We show that RNA reproduction is improbable in low and high diversity of finite populations; however, it could robustly occur in an intermediate sequence diversity. The intermediate range broadens toward higher diversity as population size increases. We also found that emergent reproducible RNAs likely form autocatalytic networks and collectively reproduce by catalyzing the formation of each other, allowing the expansion of information capacity. These results highlight the potential of abiotic RNAs, neither abundant nor diverse, to kick-start autocatalytic reproduction through spontaneous network formation. MDPI 2019-02-21 /pmc/articles/PMC6463154/ /pubmed/30795529 http://dx.doi.org/10.3390/life9010020 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Mizuuchi, Ryo
Lehman, Niles
Limited Sequence Diversity Within a Population Supports Prebiotic RNA Reproduction
title Limited Sequence Diversity Within a Population Supports Prebiotic RNA Reproduction
title_full Limited Sequence Diversity Within a Population Supports Prebiotic RNA Reproduction
title_fullStr Limited Sequence Diversity Within a Population Supports Prebiotic RNA Reproduction
title_full_unstemmed Limited Sequence Diversity Within a Population Supports Prebiotic RNA Reproduction
title_short Limited Sequence Diversity Within a Population Supports Prebiotic RNA Reproduction
title_sort limited sequence diversity within a population supports prebiotic rna reproduction
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6463154/
https://www.ncbi.nlm.nih.gov/pubmed/30795529
http://dx.doi.org/10.3390/life9010020
work_keys_str_mv AT mizuuchiryo limitedsequencediversitywithinapopulationsupportsprebioticrnareproduction
AT lehmanniles limitedsequencediversitywithinapopulationsupportsprebioticrnareproduction