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Limited Sequence Diversity Within a Population Supports Prebiotic RNA Reproduction
The origins of life require the emergence of informational polymers capable of reproduction. In the RNA world on the primordial Earth, reproducible RNA molecules would have arisen from a mixture of compositionally biased, poorly available, short RNA sequences in prebiotic environments. However, it r...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6463154/ https://www.ncbi.nlm.nih.gov/pubmed/30795529 http://dx.doi.org/10.3390/life9010020 |
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author | Mizuuchi, Ryo Lehman, Niles |
author_facet | Mizuuchi, Ryo Lehman, Niles |
author_sort | Mizuuchi, Ryo |
collection | PubMed |
description | The origins of life require the emergence of informational polymers capable of reproduction. In the RNA world on the primordial Earth, reproducible RNA molecules would have arisen from a mixture of compositionally biased, poorly available, short RNA sequences in prebiotic environments. However, it remains unclear what level of sequence diversity within a small subset of population is required to initiate RNA reproduction by prebiotic mechanisms. Here, using a simulation for template-directed recombination and ligation, we explore the effect of sequence diversity in a given population for the onset of RNA reproduction. We show that RNA reproduction is improbable in low and high diversity of finite populations; however, it could robustly occur in an intermediate sequence diversity. The intermediate range broadens toward higher diversity as population size increases. We also found that emergent reproducible RNAs likely form autocatalytic networks and collectively reproduce by catalyzing the formation of each other, allowing the expansion of information capacity. These results highlight the potential of abiotic RNAs, neither abundant nor diverse, to kick-start autocatalytic reproduction through spontaneous network formation. |
format | Online Article Text |
id | pubmed-6463154 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-64631542019-04-22 Limited Sequence Diversity Within a Population Supports Prebiotic RNA Reproduction Mizuuchi, Ryo Lehman, Niles Life (Basel) Article The origins of life require the emergence of informational polymers capable of reproduction. In the RNA world on the primordial Earth, reproducible RNA molecules would have arisen from a mixture of compositionally biased, poorly available, short RNA sequences in prebiotic environments. However, it remains unclear what level of sequence diversity within a small subset of population is required to initiate RNA reproduction by prebiotic mechanisms. Here, using a simulation for template-directed recombination and ligation, we explore the effect of sequence diversity in a given population for the onset of RNA reproduction. We show that RNA reproduction is improbable in low and high diversity of finite populations; however, it could robustly occur in an intermediate sequence diversity. The intermediate range broadens toward higher diversity as population size increases. We also found that emergent reproducible RNAs likely form autocatalytic networks and collectively reproduce by catalyzing the formation of each other, allowing the expansion of information capacity. These results highlight the potential of abiotic RNAs, neither abundant nor diverse, to kick-start autocatalytic reproduction through spontaneous network formation. MDPI 2019-02-21 /pmc/articles/PMC6463154/ /pubmed/30795529 http://dx.doi.org/10.3390/life9010020 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Mizuuchi, Ryo Lehman, Niles Limited Sequence Diversity Within a Population Supports Prebiotic RNA Reproduction |
title | Limited Sequence Diversity Within a Population Supports Prebiotic RNA Reproduction |
title_full | Limited Sequence Diversity Within a Population Supports Prebiotic RNA Reproduction |
title_fullStr | Limited Sequence Diversity Within a Population Supports Prebiotic RNA Reproduction |
title_full_unstemmed | Limited Sequence Diversity Within a Population Supports Prebiotic RNA Reproduction |
title_short | Limited Sequence Diversity Within a Population Supports Prebiotic RNA Reproduction |
title_sort | limited sequence diversity within a population supports prebiotic rna reproduction |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6463154/ https://www.ncbi.nlm.nih.gov/pubmed/30795529 http://dx.doi.org/10.3390/life9010020 |
work_keys_str_mv | AT mizuuchiryo limitedsequencediversitywithinapopulationsupportsprebioticrnareproduction AT lehmanniles limitedsequencediversitywithinapopulationsupportsprebioticrnareproduction |